Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq9 286 4e-72 seq6 176 6e-39 >seq9 Length=581722 Score = 286 bits (316), Expect = 4e-72 Identities = 1207/1888 (64%), Gaps = 42/1888 (2%) Strand=Plus/Minus Query 61846 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 61904 |||| ||||| ||||| | ||| || || | | || | | ||||||||| || || | Sbjct 354715 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 354656 Query 61905 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 61964 | | ||| |||| ||||| || |||||| || | || | | ||| || Sbjct 354655 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 354596 Query 61965 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62024 || || || |||| ||||||| |||||| ||||| || | | || |||||||| | Sbjct 354595 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 354536 Query 62025 TTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 62083 || || |||||||| | ||| ||||||| || || || || || | ||| ||| | Sbjct 354535 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 354477 Query 62084 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 62140 |||| ||||| || || ||||| || || ||| | || || | |||| || Sbjct 354476 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 354417 Query 62141 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 62200 |||| ||| | || ||| | | ||| | || || ||||| | || ||| Sbjct 354416 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 354357 Query 62201 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 62260 || |||| | || | |||| |||||| ||| || || ||||| | | | || || Sbjct 354356 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 354297 Query 62261 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62320 | ||||| ||||||| ||| || ||||| ||||| || || || | ||| ||||| Sbjct 354296 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 354237 Query 62321 AGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TA 62378 | |||||| | || | | | || |||| ||||||| ||| | ||| || || | Sbjct 354236 AAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTT 354177 Query 62379 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62438 | | || || ||| ||| || || ||| ||| | Sbjct 354176 CTTCCCCAAAGGTCAAAC--TGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATT 354119 Query 62439 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62498 ||||||| ||||| || || || ||| | | ||| || ||| ||| |||||||| Sbjct 354118 CGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGG 354059 Query 62499 TTTCGAAGATCTTCTTATTTAGATCTTGCGC--TTCCAGGCTATCAAATGGATAATTTAA 62556 | |||||||||| | || | || | || || ||| | ||||||| || || Sbjct 354058 TCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATT--CAAATGGCAAACGCAA 354001 Query 62557 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62616 | ||||| || || ||||| ||||||||||| | | || ||||| | |||| |||| Sbjct 354000 AATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATT 353941 Query 62617 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT--- 62673 ||| || ||||||||| | || || || ||| || || ||| | || | || Sbjct 353940 GGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTT 353881 Query 62674 TCTGACAA--TT---ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC-CCATC 62727 | |||||| || | ||||| | | |||| | | || | | | ||||| Sbjct 353880 TGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATC 353821 Query 62728 TA------TTACAAACAT-GTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTC 62778 | || ||| | | | |||||||| || |||| |||||||| || || || Sbjct 353820 AAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTC 353761 Query 62779 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 62838 | | || | |||| | |||||| || | ||| | ||||||| | || || Sbjct 353760 TTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAA 353701 Query 62839 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 62898 || | || ||| |||| | |||||| |||||||| ||||| ||||||||||||||||| Sbjct 353700 GTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGT 353641 Query 62899 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 62958 ||| |||| | || | || || | ||| | | ||||||| | | ||| || Sbjct 353640 CTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTC--TTTCTA 353583 Query 62959 TCTCTTTTCTCTTTCGTATAGTGT--ATACA-ATCGTTCGAACTCGTCTCCCCAAACATT 63015 | | |||||| ||| | ||| | | | || ||| || || || || || Sbjct 353582 CCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT-GAATTCATCACCATAACAATC 353524 Query 63016 GTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63075 | || || || ||||| ||| | | ||| | ||| || || | | || || || Sbjct 353523 AGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGACTCAACACG 353464 Query 63076 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63135 || ||| || | |||||| ||||| | ||| || | ||| | | ||| || || Sbjct 353463 TTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCTTC 353404 Query 63136 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63195 || || ||||||| ||| |||| ||| | | ||||| | ||||| |||||||| Sbjct 353403 TTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAA 353344 Query 63196 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63255 || | ||| | | ||||| | ||||| || || || || | ||| | ||| ||||| Sbjct 353343 ATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTT 353284 Query 63256 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATA 63315 ||| | || | | ||||||||| | ||| || || ||||| || || || | || || Sbjct 353283 GTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGTA 353224 Query 63316 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63375 || | || | || ||| || || ||| || || || || | || ||||| Sbjct 353223 AGAACCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGAT 353164 Query 63376 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 63435 || || ||| |||| || || |||||||| ||||| || ||| || |||| | Sbjct 353163 CAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCAC 353104 Query 63436 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63495 || ||||| ||||| || | | || || || || || || || |||||||| Sbjct 353103 AAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGC 353044 Query 63496 GTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63555 ||| || || || | ||||| | || || || ||||||||| |||| | ||||| | Sbjct 353043 GTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTCT 352984 Query 63556 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63615 ||| || || | ||||| | ||| | || ||||| || | |||| ||| || Sbjct 352983 ACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTTACC 352924 Query 63616 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 63673 || | ||||||||| ||| | ||||| || || |||||||| ||||| || |||| Sbjct 352923 ATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTTGAA 352864 Query 63674 AAGTCTCGTTCGTAAATAATAACCGAGT 63701 | |||| ||||| || || | |||| Sbjct 352863 A--TCTCTATCGTAGATGATGGCAGAGT 352838 >seq6 Length=680632 Score = 176 bits (194), Expect = 6e-39 Identities = 383/563 (68%), Gaps = 8/563 (1%) Strand=Plus/Minus Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882 ||||||| || || ||||| | |||||||||||| | ||||| ||||||||||| || | Sbjct 464880 ACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCA 464821 Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCC 62941 |||| ||| ||||||||||| |||||||| | || | | ||| | | || ||||| Sbjct 464820 TGAAAGGACCACCAGTTTCAACTTGAGATTCCAAGATTGAGTGCCATAACTTCT-GAGCC 464762 Query 62942 TTTATTATAGA-TTTGTATCTCTTTTCTCTTTCGTATAGTGT-ATACAATCGTTCGAACT 62999 || || | |||| || || || | || ||| ||| ||||| | | | || | Sbjct 464761 TTAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATT-TGTGATACAGTTGAACAAATT 464704 Query 63000 CGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63059 | || || | || | | || |||||| ||||| |||| | ||| |||| ||| Sbjct 464703 CTTCACCATACACCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTCTT 464644 Query 63060 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63119 | || | || ||| || ||| || ||||| || ||||| ||||| ||| | ||| | Sbjct 464643 CATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAAAACAAATCAC 464584 Query 63120 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTT-TTAAGATCGAGGAACGCCATAATATCA 63178 | ||| || || ||||| |||||| ||||| | || || |||| | |||| Sbjct 464583 GAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAAT-CCATCACATCA 464525 Query 63179 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 63238 | |||||| |||||||| || ||||| | | || || | || || || || ||||| Sbjct 464524 GCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCA 464465 Query 63239 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCA 63298 | ||||| |||||||||||| | ||||| | ||| || | ||||| || || |||||| Sbjct 464464 ACATATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTACCA 464405 Query 63299 TTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCC 63358 || | || | || || ||| |||| | ||| || || |||||| || || Sbjct 464404 TTTGATCCGGCAATGTATGCACCAGTGGCTCTAATGCTAGATATATGTAGACCGATACCA 464345 Query 63359 CCTGCCATTTTAGAGATTAATGC 63381 || || || |||||||| || Sbjct 464344 CCAGCAGCCTTCGAGATTAAAGC 464322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631801990000