Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq5 125 6e-24 seq16 114 1e-20 seq7 82.4 7e-11 >seq5 Length=1064489 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| ||||| | || ||| |||| || || || ||| Sbjct 816566 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 816625 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | ||| | || | ||| ||||| ||||| |||||||||||||| Sbjct 816626 GACACTATTGACAACGTTAAGTCTAAGATTCAA-GACAAGGAAGGTATTCCACCTGACCA 816684 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | |||| ||||| || || || | || |||| | | ||| || ||| ||||| Sbjct 816685 GCAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACTTTGTCCGACTACAA 816744 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || ||||| || || || ||| | || | ||||| || Sbjct 816745 CATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 816792 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| ||||| | || ||| | ||||| ||||| || Sbjct 816110 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTTGAAGTTGAGTCCTCC 816169 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | ||| | || | ||| ||||| || || |||||||||||||| Sbjct 816170 GACACTATTGACAACGTCAAGTCCAAGATTCAG-GACAAGGAGGGTATTCCACCTGACCA 816228 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | ||||||||||||| || || | ||||||| | || | ||| ||||| Sbjct 816229 GCAGAGACTTATTTTTGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAA 816288 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || ||||| || || || || | || | ||||| || Sbjct 816289 CATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 816336 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| ||||| | || ||| |||| || ||||| || Sbjct 816338 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 816397 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || ||||| || | ||| || ||| ||||| || || || ||||||||||| Sbjct 816398 GATACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 816457 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | |||| |||||||| || || | ||||||| | | || | ||| ||||| Sbjct 816458 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAAC 816517 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || || || || || || || | || | ||||| || Sbjct 816518 ATTCAGAAGGAGTCGACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 816564 >seq16 Length=161790 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || ||||| ||||||| | || || ||||| || Sbjct 4346 ATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTCC 4405 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || || || ||| || ||| ||||||||||| || |||||||||| Sbjct 4406 GACACTATTGA--CAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACC 4463 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| | |||| |||||||| || || | || |||| | | || | || |||| Sbjct 4464 AGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACA 4523 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | ||||| || || ||||| || || || ||||| || | ||||| || Sbjct 4524 ACATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGG 4572 >seq7 Length=598726 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| ||||||||||| |||| || | || || ||||| |||||||| || Sbjct 431899 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 431840 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || | ||| || ||| ||||| || || || ||||||||||| ||| | || Sbjct 431839 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACTT 431780 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAA 25187 || || ||||| || || | || || | | | || | || ||||| || || || Sbjct 431779 ATCTTCGCCGGTAAGCAGCTCGAGGACGGTAGAACCCTTTCTGACTACAACATCCAGAAG 431720 Query 25188 GAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| | ||||| || || || | ||||| || Sbjct 431719 GAGTCCACTTTGCATTTGGTCCTCAGATTGAGAGGTGG 431682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327867970375