Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 125 6e-24
seq16 114 1e-20
seq7 82.4 7e-11
>seq5
Length=1064489
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| ||||| ||||| | || ||| |||| || || || |||
Sbjct 816566 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 816625
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | ||| | || | ||| ||||| ||||| ||||||||||||||
Sbjct 816626 GACACTATTGACAACGTTAAGTCTAAGATTCAA-GACAAGGAAGGTATTCCACCTGACCA 816684
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | |||| ||||| || || || | || |||| | | ||| || ||| |||||
Sbjct 816685 GCAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACTTTGTCCGACTACAA 816744
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| || || ||||| || || || ||| | || | ||||| ||
Sbjct 816745 CATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 816792
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| ||||| ||||| | || ||| | ||||| ||||| ||
Sbjct 816110 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTTGAAGTTGAGTCCTCC 816169
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | ||| | || | ||| ||||| || || ||||||||||||||
Sbjct 816170 GACACTATTGACAACGTCAAGTCCAAGATTCAG-GACAAGGAGGGTATTCCACCTGACCA 816228
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | ||||||||||||| || || | ||||||| | || | ||| |||||
Sbjct 816229 GCAGAGACTTATTTTTGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAA 816288
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| || || ||||| || || || || | || | ||||| ||
Sbjct 816289 CATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 816336
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| ||||| ||||| | || ||| |||| || ||||| ||
Sbjct 816338 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 816397
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| ||||| || | ||| || ||| ||||| || || || |||||||||||
Sbjct 816398 GATACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 816457
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| | |||| |||||||| || || | ||||||| | | || | ||| |||||
Sbjct 816458 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAAC 816517
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| || || || || || || || || | || | ||||| ||
Sbjct 816518 ATTCAGAAGGAGTCGACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 816564
>seq16
Length=161790
Score = 114 bits (126), Expect = 1e-20
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | || ||||| ||||||| | || || ||||| ||
Sbjct 4346 ATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTCC 4405
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| || ||| ||||||||||| || ||||||||||
Sbjct 4406 GACACTATTGA--CAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACC 4463
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| | |||| |||||||| || || | || |||| | | || | || ||||
Sbjct 4464 AGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACA 4523
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| ||||| || || ||||| || || || ||||| || | ||||| ||
Sbjct 4524 ACATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGG 4572
>seq7
Length=598726
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||| ||||||||||| |||| || | || || ||||| |||||||| ||
Sbjct 431899 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 431840
Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127
|| | ||| || ||| ||||| || || || ||||||||||| ||| | ||
Sbjct 431839 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACTT 431780
Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAA 25187
|| || ||||| || || | || || | | | || | || ||||| || || ||
Sbjct 431779 ATCTTCGCCGGTAAGCAGCTCGAGGACGGTAGAACCCTTTCTGACTACAACATCCAGAAG 431720
Query 25188 GAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||| | ||||| || || || | ||||| ||
Sbjct 431719 GAGTCCACTTTGCATTTGGTCCTCAGATTGAGAGGTGG 431682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327867970375
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |