Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq9 192 7e-44 seq1 107 2e-18 seq6 98.7 1e-15 >seq9 Length=581722 Score = 192 bits (212), Expect = 7e-44 Identities = 732/1137 (64%), Gaps = 29/1137 (3%) Strand=Plus/Minus Query 114110 TCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCA 114169 |||||||| || ||| | || ||||| || || | |||| |||||||| || || Sbjct 354164 TCAAACTGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATTCGTATGGACCTTCG 354105 Query 114170 ACCTCCGCCAATTCG-GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCG 114228 || || | || ||| | ||| | || |||||||| || ||||| || || | Sbjct 354104 GACTTGGCGAGCTCAAGAGAG-GACTCCAAAGCAGCGTGATAAATGGTCTCGAAGATCTG 354046 Query 114229 AGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATC 114288 | |||| | |||| |||| || || ||||| | | || | | ||||| |||| Sbjct 354045 AATGTTCAATTCCTTAGCCTTTTCAGATTCAAATGGCAAACGCAAAATCATAAAGGCATC 353986 Query 114289 CGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGT 114348 || | |||||| ||||||||| ||||||| | | ||||||||| || |||| ||| | Sbjct 353985 AGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATTGGAGTTTCTAGCT-T 353927 Query 114349 CTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 114407 || || || || | || | || || | || || | || || ||||||||||| | Sbjct 353926 CTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTTTGTGACAACCTTGG 353867 Query 114408 TGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC---------------TCTTCAT 114452 |||| ||| | ||| | | | || | |||| | |||| Sbjct 353866 CAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATCAAGGGATTTTTCAA 353807 Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512 ||| | || || | || || || |||| ||||| |||| || || |||| Sbjct 353806 TGAAAG-CT--GGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAG 353750 Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572 ||| || | ||| || |||||| || ||| ||| || | ||||||||||| || | Sbjct 353749 AGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGT 353690 Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632 | | ||| |||||| |||||||||||||||||| |||| || || ||||| || |||| Sbjct 353689 TAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGG 353630 Query 114633 ACTTGAGAATAGCCTTCCA-GACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCC 114691 | || || || | ||| || | | | || | ||||| | | || || || Sbjct 353629 CATCAAGGATTGCATACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGACCTTCT 353571 Query 114692 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 114751 | ||| ||||| || || || | || || ||||| || | || |||||| Sbjct 353570 TTCTCATACTTCTCATAAAGAGCCTTGAATTCATCACCATAACAATCAGCAAGACCTGGT 353511 Query 114752 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGG 114811 || | || ||| |||| | || ||||| |||| ||||||||| | |||||| | Sbjct 353510 GCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGACTCAACACGTTCCATGAACAAA 353451 Query 114812 TCTGGGATCCAGAGAGCTGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATT 114870 || |||||||| | |||| ||| | ||| ||| | || | ||||| | || ||||| Sbjct 353450 TCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATC-TCTTCTTTACCGTGATT 353392 Query 114871 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 114930 | | || | || || | |||||| |||||||| ||||||| || | || | Sbjct 353391 CTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAA 353332 Query 114931 TG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCG 114987 || ||| | | |||| | |||| || || | || ||| ||||| || || Sbjct 353331 TGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACG 353272 Query 114988 AAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGC 115047 || ||||||||| | ||| | ||| || || || || ||| ||| | || Sbjct 353271 AACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCTGTAGC 353212 Query 115048 TCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTC 115107 ||| || | ||||||||| | ||| ||||| || || ||| ||||| || || | Sbjct 353211 TCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTG 353152 Query 115108 CGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCT 115167 | | | | | ||||| || ||||| || || | | | || | |||||| || Sbjct 353151 TTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGA 353092 Query 115168 CGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 ||||| ||||| ||| |||||||||||||| | ||||| | |||||| |||| Sbjct 353091 GGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAA 353035 >seq1 Length=2087116 Score = 107 bits (118), Expect = 2e-18 Identities = 140/193 (73%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 160682 ATTGTTTTGCCAGTAGGTGTCTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAG 160741 |||||| ||||||||| ||| ||||| || || ||| | || ||| | || |||||| Sbjct 445844 ATTGTT---CCAGTAGGTACCTATGGTCGTGTTGCTCCACGTTCCGGTTTGGCCGTGAAG 445900 Query 160742 AGTGGTATCCAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTC 160801 |||||| | ||||| ||||| || ||| ||||||||| ||||||||| || || Sbjct 445901 CACGGTATCTCAACAGGTGCCGGTGTCGTTGATGCAGACTACAGAGGTGAAGTGAAGGTT 445960 Query 160802 GTTCTCTTCAATCACGGGCACACAGATTTCCAAATCAAAAGGGGGGATCGCATCGCGCAA 160861 ||||||||||| ||| | ||| || ||| |||| | ||| || | ||||| || Sbjct 445961 GTTCTCTTCAACCACAGTGACAAGGACTTCTCAATCGCTAAGGGTGACAGAATCGCTCAG 446020 Query 160862 CTCATCTTAGAGA 160874 ||| | || |||| Sbjct 446021 CTCGTTTTGGAGA 446033 Score = 95.1 bits (104), Expect = 1e-14 Identities = 253/384 (66%), Gaps = 6/384 (2%) Strand=Plus/Plus Query 172621 ACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCG 172680 |||||| || || ||||||||| ||||| ||| ||||| | ||| | || ||||| | Sbjct 116090 ACCCTTGATATGGGAACCATCGGTATCCTGATCTGTCATGAGCATGATACGGCCATATCT 116149 Query 172681 --AAG-CTCGGAAACATCTTGATACTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAG 172737 ||| || || | || | | || ||| ||||| | ||| | ||||| ||| | Sbjct 116150 CAAAGACTTGGTGTCCTCGTACTTCTTCTTG---TGTTGCAAACCAATGATCTGCTTCAA 116206 Query 172738 ATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAGCATCGCGGACATTTTTACA 172797 |||||| ||| || | || ||| | ||||| || | ||||| Sbjct 116207 GGCATTGATCTCCGCATTATTGGAGATTTGGGTATGAGAAGCCTCTCTAACATTCAATGG 116266 Query 172798 CTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAAC 172857 || ||||| | ||||| ||| |||| || | || || || | ||||| ||||| Sbjct 116267 TTTACCACGCAACGGGAAACAACCATAGTAGTCTCTTCCGACAACTGCTAGACCTGCAAC 116326 Query 172858 TGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGC 172917 || | | | |||||||||||||| |||| ||| | ||||| || | || | Sbjct 116327 GGCCAATGCCAAGGCGGAATCACCCTCTGTCAAGATCAAAGTACATTTATAACCTTCTTT 116386 Query 172918 CGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACCAGTAATTTTGGACTTGCGGGC 172977 || || ||| |||| ||||| | | ||| || | |||||| ||||||| | || Sbjct 116387 AGTACCTGCCATGTTGGCATCATGAAGCTTTGGCAAGTTGGTAATTCTGGACTTTCTGGA 116446 Query 172978 ACCATCTGTCTTCTTGAGTTCCTT 173001 ||||||||||||||||||| |||| Sbjct 116447 ACCATCTGTCTTCTTGAGTGCCTT 116470 >seq6 Length=680632 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| | ||| || |||||| | || | ||||| ||||| || || Sbjct 382391 GGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACC 382332 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||| | ||| | |||||||||||||||||| | ||| ||||| ||||||||||| Sbjct 382331 TGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGAT 382272 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAA 126224 || || ||| || || |||| || | |||| | || || || ||| | | ||| Sbjct 382271 ACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAG-GCTTCTTCATCGGCAA 382213 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 126284 ||| ||| ||||| | ||||| |||| ||||| || | |||| || || | || Sbjct 382212 TCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAA 382153 Query 126285 A 126285 | Sbjct 382152 A 382152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353413327000