Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq9 185 1e-41 seq1 120 4e-22 seq6 93.3 5e-14 >seq9 Length=581722 Score = 185 bits (204), Expect = 1e-41 Identities = 678/1050 (65%), Gaps = 35/1050 (3%) Strand=Plus/Minus Query 116161 GCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCA 116220 || |||||||| || ||||| || || || |||| | |||| |||| || || ||| Sbjct 354074 GCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATTCA 354015 Query 116221 AACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 116280 || | | ||| | | ||||| |||| || | |||||| ||||||||| ||||||| Sbjct 354014 AATGGCAAACGCAAAATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGT 353955 Query 116281 CGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAAC 116339 | | ||||||||| || |||| ||| ||| || || || | || | || || | Sbjct 353954 CTGTTTCTCATATTGGAGTTTCTAGCT-TCTGGGACTGGGTAGTAGTTACGGTCAATGAT 353896 Query 116340 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 116399 || || | || || ||||||||||| | |||| ||| | ||| | | | || | Sbjct 353895 TCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGT 353836 Query 116400 GCGAGTC---------------TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 116444 |||| | |||| ||| | || || | || || || |||| Sbjct 353835 CTGAGTGGTACCATCAAGGGATTTTTCAATGAAAG-CT--GGCAATGCAATGGAGGCCAA 353779 Query 116445 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGA 116504 ||||| |||| || || |||| ||| || | ||| || |||||| || || Sbjct 353778 GTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGA 353719 Query 116505 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAG 116564 | ||| || | ||||||||||| || || | ||| |||||| ||||||||||| || Sbjct 353718 AGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAG 353659 Query 116565 CATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-TACATCGGCGG 116623 ||| |||| || || ||||| || |||| | || || || | ||| || | | | Sbjct 353658 CATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGC 353599 Query 116624 CTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACT 116683 || | ||||| | | || || || | ||| ||||| || || |||| || | Sbjct 353598 CTTG-ACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTTGAATT 353540 Query 116684 CTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGAC 116743 | ||||| | || | || |||||||| | || |||| |||| | || ||||| || Sbjct 353539 CATCACCATAACAATCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCAC 353480 Query 116744 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 116803 || |||||| || | |||||| | || |||||||| | || | ||| | ||| | Sbjct 353479 CATTAGACTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCAC 353420 Query 116804 GA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 116862 || | || | ||||| | || ||||| | | || | || || | |||||| Sbjct 353419 GAGCTCTGATC-TCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCT 353361 Query 116863 GCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGACGACCAGCCTGG 116916 |||||||| ||||||| || | || | || || | |||| |||| | ||| Sbjct 353360 GCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTG---TTACCACCTTGG 353304 Query 116917 TTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGG 116976 | || || | || || |||||| || |||| ||||||||| | ||| | ||| Sbjct 353303 TCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTA 353244 Query 116977 CCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAAT 117035 || || || || ||| || || || | ||||| || | |||||||| | ||| || Sbjct 353243 CCGTTAGTACCAGCAATGTAAGAACCTG-TAGCTCTAACGTTATGGATGTGTAAACCGAT 353185 Query 117036 ACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGAT 117095 ||| || || ||| ||||| || || | | | | | | ||||| || ||||| Sbjct 353184 ACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGAT 353125 Query 117096 CGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGC 117155 || || | | | || | ||||| || ||||| ||||| ||| |||||||| Sbjct 353124 GGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGC 353065 Query 117156 GTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 |||||| | ||||| | |||||| |||| Sbjct 353064 GTTGAACAAAGTTGGAGAAGCGTGGGTGAA 353035 >seq1 Length=2087116 Score = 120 bits (132), Expect = 4e-22 Identities = 194/279 (70%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 163344 ATTGTTTTGCCAGTAGGTGTGTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAG 163403 |||||| ||||||||| || ||||| || || ||| | || ||| | || |||||| Sbjct 445844 ATTGTT---CCAGTAGGTACCTATGGTCGTGTTGCTCCACGTTCCGGTTTGGCCGTGAAG 445900 Query 163404 AGCGGTATCCAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTC 163463 ||||||| | ||||| ||||| || ||| ||||||||| ||||||||| || || Sbjct 445901 CACGGTATCTCAACAGGTGCCGGTGTCGTTGATGCAGACTACAGAGGTGAAGTGAAGGTT 445960 Query 163464 GTTCTCTTCAATCACGGACACATGGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAA 163523 ||||||||||| ||| | ||| ||| ||| |||| ||||| || | ||||| || Sbjct 445961 GTTCTCTTCAACCACAGTGACAAGGACTTCTCAATCGCTAAGGGTGACAGAATCGCTCAG 446020 Query 163524 CTCATCTTAGAGAGGTGTGAGACACCCCAAGTTGAAGAAATTGGTGCGG------TTGAG 163577 ||| | || |||| | || | | | || | || || |||| | || Sbjct 446021 CTCGTTTTGGAGAAGATTGTCAATGCTGAGATTCAGGAGATCACAGCGGAGGAGCTCGAT 446080 Query 163578 GAGACCGAGAGAGGTTCGGGTGGATTCGGTTCTACAGGT 163616 | || ||||||||| | ||||| ||||||||||| ||| Sbjct 446081 AACACTGAGAGAGGTGCAGGTGGTTTCGGTTCTACTGGT 446119 >seq6 Length=680632 Score = 93.3 bits (102), Expect = 5e-14 Identities = 166/240 (69%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | ||| || |||||| | || | ||||| ||||| || |||| Sbjct 382390 GCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACCT 382331 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | ||| | |||||||||||||||||| | ||| || |||||||||||||| Sbjct 382330 GGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGATA 382271 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698 || || ||| || || |||| || | ||| | || || | ||| | ||| Sbjct 382270 CCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAG-GCTTCTTCATCGGCAAT 382212 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758 ||| ||| ||||| | ||||| |||| |||||||| | |||| || || | ||| Sbjct 382211 CCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAAA 382152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507008279000