Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq9 185 1e-41
seq1 120 4e-22
seq6 93.3 5e-14
>seq9
Length=581722
Score = 185 bits (204), Expect = 1e-41
Identities = 678/1050 (65%), Gaps = 35/1050 (3%)
Strand=Plus/Minus
Query 116161 GCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCA 116220
|| |||||||| || ||||| || || || |||| | |||| |||| || || |||
Sbjct 354074 GCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATTCA 354015
Query 116221 AACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 116280
|| | | ||| | | ||||| |||| || | |||||| ||||||||| |||||||
Sbjct 354014 AATGGCAAACGCAAAATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGT 353955
Query 116281 CGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAAC 116339
| | ||||||||| || |||| ||| ||| || || || | || | || || |
Sbjct 353954 CTGTTTCTCATATTGGAGTTTCTAGCT-TCTGGGACTGGGTAGTAGTTACGGTCAATGAT 353896
Query 116340 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 116399
|| || | || || ||||||||||| | |||| ||| | ||| | | | || |
Sbjct 353895 TCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGT 353836
Query 116400 GCGAGTC---------------TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 116444
|||| | |||| ||| | || || | || || || ||||
Sbjct 353835 CTGAGTGGTACCATCAAGGGATTTTTCAATGAAAG-CT--GGCAATGCAATGGAGGCCAA 353779
Query 116445 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGA 116504
||||| |||| || || |||| ||| || | ||| || |||||| || ||
Sbjct 353778 GTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGA 353719
Query 116505 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAG 116564
| ||| || | ||||||||||| || || | ||| |||||| ||||||||||| ||
Sbjct 353718 AGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAG 353659
Query 116565 CATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-TACATCGGCGG 116623
||| |||| || || ||||| || |||| | || || || | ||| || | | |
Sbjct 353658 CATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGC 353599
Query 116624 CTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACT 116683
|| | ||||| | | || || || | ||| ||||| || || |||| || |
Sbjct 353598 CTTG-ACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTTGAATT 353540
Query 116684 CTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGAC 116743
| ||||| | || | || |||||||| | || |||| |||| | || ||||| ||
Sbjct 353539 CATCACCATAACAATCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCAC 353480
Query 116744 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 116803
|| |||||| || | |||||| | || |||||||| | || | ||| | ||| |
Sbjct 353479 CATTAGACTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCAC 353420
Query 116804 GA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 116862
|| | || | ||||| | || ||||| | | || | || || | ||||||
Sbjct 353419 GAGCTCTGATC-TCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCT 353361
Query 116863 GCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGACGACCAGCCTGG 116916
|||||||| ||||||| || | || | || || | |||| |||| | |||
Sbjct 353360 GCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTG---TTACCACCTTGG 353304
Query 116917 TTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGG 116976
| || || | || || |||||| || |||| ||||||||| | ||| | |||
Sbjct 353303 TCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTA 353244
Query 116977 CCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAAT 117035
|| || || || ||| || || || | ||||| || | |||||||| | ||| ||
Sbjct 353243 CCGTTAGTACCAGCAATGTAAGAACCTG-TAGCTCTAACGTTATGGATGTGTAAACCGAT 353185
Query 117036 ACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGAT 117095
||| || || ||| ||||| || || | | | | | | ||||| || |||||
Sbjct 353184 ACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGAT 353125
Query 117096 CGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGC 117155
|| || | | | || | ||||| || ||||| ||||| ||| ||||||||
Sbjct 353124 GGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGC 353065
Query 117156 GTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185
|||||| | ||||| | |||||| ||||
Sbjct 353064 GTTGAACAAAGTTGGAGAAGCGTGGGTGAA 353035
>seq1
Length=2087116
Score = 120 bits (132), Expect = 4e-22
Identities = 194/279 (70%), Gaps = 9/279 (3%)
Strand=Plus/Plus
Query 163344 ATTGTTTTGCCAGTAGGTGTGTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAG 163403
|||||| ||||||||| || ||||| || || ||| | || ||| | || ||||||
Sbjct 445844 ATTGTT---CCAGTAGGTACCTATGGTCGTGTTGCTCCACGTTCCGGTTTGGCCGTGAAG 445900
Query 163404 AGCGGTATCCAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTC 163463
||||||| | ||||| ||||| || ||| ||||||||| ||||||||| || ||
Sbjct 445901 CACGGTATCTCAACAGGTGCCGGTGTCGTTGATGCAGACTACAGAGGTGAAGTGAAGGTT 445960
Query 163464 GTTCTCTTCAATCACGGACACATGGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAA 163523
||||||||||| ||| | ||| ||| ||| |||| ||||| || | ||||| ||
Sbjct 445961 GTTCTCTTCAACCACAGTGACAAGGACTTCTCAATCGCTAAGGGTGACAGAATCGCTCAG 446020
Query 163524 CTCATCTTAGAGAGGTGTGAGACACCCCAAGTTGAAGAAATTGGTGCGG------TTGAG 163577
||| | || |||| | || | | | || | || || |||| | ||
Sbjct 446021 CTCGTTTTGGAGAAGATTGTCAATGCTGAGATTCAGGAGATCACAGCGGAGGAGCTCGAT 446080
Query 163578 GAGACCGAGAGAGGTTCGGGTGGATTCGGTTCTACAGGT 163616
| || ||||||||| | ||||| ||||||||||| |||
Sbjct 446081 AACACTGAGAGAGGTGCAGGTGGTTTCGGTTCTACTGGT 446119
>seq6
Length=680632
Score = 93.3 bits (102), Expect = 5e-14
Identities = 166/240 (69%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| | ||| || |||||| | || | ||||| ||||| || ||||
Sbjct 382390 GCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACCT 382331
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||| | ||| | |||||||||||||||||| | ||| || ||||||||||||||
Sbjct 382330 GGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGATA 382271
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698
|| || ||| || || |||| || | ||| | || || | ||| | |||
Sbjct 382270 CCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAG-GCTTCTTCATCGGCAAT 382212
Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758
||| ||| ||||| | ||||| |||| |||||||| | |||| || || | |||
Sbjct 382211 CCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAAA 382152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507008279000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |