Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq7 104 3e-17 seq16 96.9 4e-15 seq5 89.7 6e-13 >seq7 Length=598726 Score = 104 bits (114), Expect = 3e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | | |||| |||||| || |||||| ||||| |||||||| || Sbjct 431682 CCACCTCTCAATCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 431741 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | |||| ||||||||||| |||||||| || | | ||||||||| | || Sbjct 431742 AGGGTTCTACCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 431801 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | |||||||||| |||||| ||||| ||| | | | ||||| || || || Sbjct 431802 ATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCAGAGGACTCAAC 431860 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAA 46584 |||| || ||||| || || |||| || ||||| || Sbjct 431861 CTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 431899 >seq16 Length=161790 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| || || || | | || || |||||||| ||||| || Sbjct 4537 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAA 4478 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||| | || | | || |||||| |||||| ||||| | Sbjct 4477 GATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTTGTCCTGGATCTTGGACTTGACATT 4418 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || |||| |||||||| || ||||| || || ||||| Sbjct 4417 GTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAAC 4358 Query 46582 AAAGATTTGCATTTTG 46597 |||||| ||||| ||| Sbjct 4357 AAAGATCTGCATCTTG 4342 >seq5 Length=1064489 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | ||| |||| || | || |||||| || || ||||||||||| Sbjct 816336 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 816277 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || ||||||||||| ||||| || || | | ||||||||| | || Sbjct 816276 AGGGTTCTGCCATCTTCGAGCTGCTTACCGGCAAAAATAAGTCTCTGCTGGTCAGGTGGA 816217 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | |||||||||| ||||| ||||| ||| | | | |||||| || || || Sbjct 816216 ATACCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCAATAGTGTCGGAGGACTCAAC 816158 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || || || || |||| || || || || |||||||| Sbjct 816157 TTCAAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 816110 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | ||| |||| || | || |||||| || || ||||||||||| Sbjct 816564 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAG 816505 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || || |||||||| ||||| || || | | ||||||||| | || Sbjct 816504 AGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 816445 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | |||||||||| |||||| ||| | ||| | | | || ||| || || || Sbjct 816444 ATACCCTCCTTGTCCTGGATCTTAGACTT-AACGTTGTCAATAGTATCGGAGGACTCAAC 816386 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || || || || |||| || || |||||||| ||||| Sbjct 816385 CTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 816338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238223363000