Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq10 120 2e-21 seq1 111 1e-18 seq7 95.1 9e-14 >seq10 Length=428028 Score = 120 bits (132), Expect = 2e-21 Identities = 241/357 (68%), Gaps = 3/357 (1%) Strand=Plus/Minus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||| || || ||||| ||||| | ||||| || || || || || | ||| | || Sbjct 130172 ATCGAAGTCCTCACCACCCAAGTGAGTATCACCGGAAGTGGCCAAAACCTCGAAGACACC 130113 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 | ||||| |||||| || | ||||| ||| |||||||||| || | | || | Sbjct 130112 AGATTCAATAGACAAGAGGGAAACATCGAAGGTACCACCACCCAAGTCGTAGACAATGA- 130054 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 || | || ||| || || | |||||| || | |||||||||||||||||| Sbjct 130053 --TCTGGTGTTCACCTTCACCCTTGTCCATACCATAGGCGATAGCAGCAGCAGTTGGTTC 129996 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 || | ||||| | ||| || | ||||||||| | || ||||| ||||| || ||| | Sbjct 129995 GTTGACGATTCTGAGAACGTTCAAACCAGCAATGGTACCGGCATCCTTAGTAGCCTGTTT 129936 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325 || | |||||| || || || |||||||| | |||||| | ||| || | |||| | Sbjct 129935 CTGAGCATCGTTGAAGTAAGCTGGAACAGTGACAACGGCGTGAGTAACCTTGGTACCCAA 129876 Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 ||| | ||| | ||||| |||| |||||||| | || || | ||||| Sbjct 129875 GTAATCCTCTGCAATGCTCTTCATCTTACCCAAAATCATAGCGGAGATCTCCTCTGG 129819 >seq1 Length=2087116 Score = 111 bits (122), Expect = 1e-18 Identities = 228/337 (68%), Gaps = 4/337 (1%) Strand=Plus/Minus Query 635403 ATAATGCTCACAAGGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTGACAGAGG 635462 || |||| ||| |||||| || |||||||| ||||||||||| | || |||||||||| Sbjct 116409 ATGATGCCAACATGGCAGGTACTAAAGAAGGTTATAAATGTACTTTGATCTTGACAGAGG 116350 Query 635463 GAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAATGTTATTGGAAGAGATTATTATG 635522 | ||||| || |||| || | | ||||| ||| | |||||||| || |||| Sbjct 116349 GTGATTCCGCCTTGGCATTGGCCGTTGCAGGTCTAGCAGTTGTCGGAAGAGACTACTATG 116290 Query 635523 GAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTG 635582 | |||||| | | || |||| ||||||||||| || ||| || || |||| Sbjct 116289 GTTGTTTCCCGTTGCGTGGTAAACCATTGAATGTTAGAGAGGCTTCTCATACCCAAATCT 116230 Query 635583 CTGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTTGA--ACAAGGAAAAGT 635640 | |||||| ||| || | || | || | || |||| | | ||||| | ||| Sbjct 116229 CCAATAATGCGGAGATCAATGCCTTGAAGCAGATCATTGGTTTGCAACACAAGAAGAAG- 116171 Query 635641 TTATGATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAAGATGT 635700 || || || ||| ||| ||||||| |||| ||| | | | ||||| ||| Sbjct 116170 -TACGAGGACACCAAGTCTTTGAGATATGGCCGTATCATGCTCATGACAGATCAGGATAC 116112 Query 635701 TGATGGGTACCATATCAAAGGATTAATCATGAATTTT 635737 ||||| | ||||||||| || ||| | || || ||| Sbjct 116111 CGATGGTTCCCATATCAAGGGTTTATTGATCAACTTT 116075 >seq7 Length=598726 Score = 95.1 bits (104), Expect = 9e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | |||||| || ||||| ||||||||||| || |||| | | |||||| || Sbjct 236193 TTCTCCAAACCATAAGCCAAAGCGGCAGCAGTTGGCTCGTTAACGACACGCAAAACGTTC 236252 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| |||| || ||||| ||||| || ||||| || |||||||| || || || Sbjct 236253 AAACCGACAATCTGACCGGCATCCTTAGTAGCCTGTCTCTGAGAATCGTTGAAGTAAGCT 236312 Query 518288 GGAACAGTAATAACGGC 518304 || ||||||| |||||| Sbjct 236313 GGGACAGTAACAACGGC 236329 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300 |||||||| |||| ||| || |||||||| || || || || |||||| | ||||| Sbjct 439872 AAACCGTAGGCAATAGCAGCGGCAGTTGGCTCGTTGATGATACGAAGAACGTTCAAACCA 439813 Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 322360 ||||| | | | ||| ||||||||||||||||| ||| || || || ||||| ||| Sbjct 439812 GCAATGAGACCGGCATCCTTAGTTGCTTGTCTCTGTGAGTCGTTGAAGTAAGCTGGAACA 439753 Query 322361 GTAATAACTGC 322371 || || || || Sbjct 439752 GTGATGACAGC 439742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821159417650