Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq9 264 1e-65 seq6 123 3e-23 seq1 118 1e-21 >seq9 Length=581722 Score = 264 bits (292), Expect = 1e-65 Identities = 1116/1740 (64%), Gaps = 63/1740 (4%) Strand=Plus/Minus Query 105595 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTT 105654 ||||||||| || ||||| | || | ||||| |||| | |||||||| | | ||| Sbjct 354672 ATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTT 354613 Query 105655 GGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACC 105714 ||| |||||| | ||| || |||| | |||| || |||||||| | | Sbjct 354612 ACCCATAGTTGGAGCTCTAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGC 354553 Query 105715 ACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA----TTTCCCACACTGTGCGGT 105770 ||| | || |||||||| |||| | ||| |||| | ||||| || || || Sbjct 354552 ACGATCAGCAGCCATATCGATGATAGTCTT----TTGAGAAATCTCCCAAACGGTCTTGT 354497 Query 105771 AGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGA 105830 | | || || | || | ||| || | || | |||||||| ||||| | || Sbjct 354496 ACAAATCTTTCAATTCCTTTGGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGA 354437 Query 105831 CCATGAGATCCTTCATATCCTTGGACCAAAGACC--AATCTTCTTGAGATCATTGACGAG 105888 ||| || ||||||| | ||||| ||| |||| | | |||| | | Sbjct 354436 TGATGTGACTCTTCATAGAGTCATCCCAAACACCCAAATCAACC--AAATCACGAAGCAA 354379 Query 105889 ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCG 105947 || ||| |||||| || || || || ||| | | ||| || ||||| | | Sbjct 354378 ATATGGGTTAACAATCTGGAATTCACCAGCAAGGACACGACG-AGAGTAAATGTTAGAAG 354320 Query 105948 TGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTG 106007 |||| ||||| || ||||| || | |||||||||||| | || ||||| |||||||||| Sbjct 354319 TGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTG 354260 Query 106008 GTGCCATCA--AAAGACTGTTACGAAGACCCT--TTTCCTTGATGCGTTCCTTGAGAACA 106063 | || | | ||||| ||| | | ||| | || | || | |||| ||| | Sbjct 354259 GAGCAACAAGCAAAGA--GTTTCTCAAACCGTACTTGACAATATCAG--CCTTAAGAGTA 354204 Query 106064 TCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCAC-CCCT 106120 ||||| || | | | | |||| | |||| | ||||| |||||| |||| Sbjct 354203 TCCCAATCCCACAAATCGGAAGGCTTTCTTC--CCCAAAGGTCAAACTGAAGCTGACCCT 354146 Query 106121 TGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAG 106180 | | | |||| ||||| | |||| || || | ||||| || | || | ||| Sbjct 354145 TAGAAGCTGGG-GAACCTTGGAATGATTCGTATGGACCTTCGGACTTGGCGAGCTCAAGA 354087 Query 106181 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 106240 | ||||| | |||||||| ||||| || ||||| || |||| ||||| || Sbjct 354086 GAGGACTCCAAAGCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCC 354027 Query 106241 TCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 106300 | || || ||||||| | || | | ||||| |||| || | |||||||||||| Sbjct 354026 TTTTCAGATTCAAATGGCAAACGCAAAATCATAAAGGCATCAGCTAAACCTTGAACACCG 353967 Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATT 106359 | |||| ||||||| || |||||| || |||| || ||| || || || | || Sbjct 353966 AGGGCAATTGGTCTGTTTCTCATATTGGAGTTTCTAGCT-TCTGGGACTGGGTAGTAGTT 353908 Query 106360 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 106419 | |||||||| || ||| | || || || |||| ||| | |||| ||| | ||| Sbjct 353907 ACGGTCAATGATTCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGATGCAAACGTTC 353848 Query 106420 ATAATCAAAAGTGCGAGTC---------------TCTTCATTGACATACTTTGGAAGGGC 106464 | | | | |||| |||| | |||| ||| | ||| | || Sbjct 353847 AAAGTTATAAGTCTGAGTGGTACCATCAAGGGATTTTTCAATGAAAGC---TGGCAATGC 353791 Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524 || || ||||| || |||||||| || || || | ||| || | ||| || Sbjct 353790 AATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACA 353731 Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584 ||||||||| ||| ||| ||| | ||||| ||||| |||||| |||| | ||| || || Sbjct 353730 ACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGC 353671 Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||||||||| |||||| | || || || ||||| ||||| | | || ||||| | ||| Sbjct 353670 ATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCA 353611 Query 106645 CA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGA 106703 || | | | | || | ||| | | | || || || ||| ||||| || | Sbjct 353610 CAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAA 353552 Query 106704 GGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 106763 | || | || || ||||| || | ||||||||||| | | |||| |||| | Sbjct 353551 GAGCCTTGAATTCATCACCATAACAATCAGCAAGACCTGGTGCTTCATTTGGAGAGAACA 353492 Query 106764 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 106823 || ||||| |||| |||||| || | |||||| | || || ||||||| | || Sbjct 353491 AAGTCCATTCACCATTAGACTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTG 353432 Query 106824 AAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 106882 || | ||| | | | | || |||||| | ||| || || || | || | ||| Sbjct 353431 GGAACAAATCACGAGCTCTGA-TCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAA 353373 Query 106883 TCCATGATATCCGCGTGCCATGGCTCAAGATA------GACTGCGATAGATCCCTTTCGA 106936 || | |||||| ||||||||||| || | ||| | ||| || || ||| | Sbjct 353372 TCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTA 353313 Query 106937 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 106996 ||| |||| | || || || || ||| |||||| || |||| ||||||||| | | Sbjct 353312 ---CCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAA 353256 Query 106997 CCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATG 107056 || | || ||| || || || ||| ||| | ||||| || | ||||||| Sbjct 353255 CCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCTGTAGCTCTAACGTTATGGATG 353196 Query 107057 TGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAG 107116 || | || ||||| ||||| ||| ||||| ||||| | | | ||| ||||| Sbjct 353195 TGTAAACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAG 353136 Query 107117 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 107176 ||||| | ||| || || || | | || | |||||| ||| ||||||||| || | Sbjct 353135 ATACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGT 353076 Query 107177 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTT 107235 || |||||||| ||||| | ||||| | ||||| |||| || || | ||||| Sbjct 353075 GGGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAA-GTATCTCTCAGACATGAG 353017 Query 107236 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || || ||||| | || || | ||| ||| || ||||| ||||| || || | ||| Sbjct 353016 GTTATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCAT 352957 >seq6 Length=680632 Score = 123 bits (136), Expect = 3e-23 Identities = 203/289 (70%), Gaps = 8/289 (3%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| | ||| ||||| ||| |||| | ||||| ||||| | || Sbjct 382391 GGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACC 382332 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||| | ||| | |||||||||||| |||||| | || || || ||||||||||| Sbjct 382331 TGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGAT 382272 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451 ||| || ||| ||||| |||| ||| | ||| |||| || | ||| | | ||| Sbjct 382271 ACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAG-GCTTCTTCATCGGCAA 382213 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 117511 |||| ||| ||||| | |||||||||| ||||||||| | ||| | ||||| | || Sbjct 382212 TCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAA 382153 Query 117512 ATAACTGCT---TCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAA 117557 | || | || || || | |||||| || || |||||||||| Sbjct 382152 ACAAATACTCAGCCTGTT---GTGGATCCTTGATATAAGTGTCAATCAA 382107 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 106455 TTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTA 106514 ||||||| || | || ||||| || ||||| || ||||| || || ||| | | Sbjct 464964 TTGGAAGAGCAACAGAGGCCAAGTTACAAACGGCAGTCTCTTCAGGTGATGAGTATTGAA 464905 Query 106515 AAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTT 106574 | ||| ||||||||| || ||| || || ||||||||||| || ||||||||| Sbjct 464904 CCACTTCACAACACAAGTTCGAGGACTTGATTGTACCCAAATTCTTCTGATTACTCTTTC 464845 Query 106575 TGTTGCACGCATCCTTGTAGAGCATG 106600 | || || |||||||| ||||||||| Sbjct 464844 TATTACAAGCATCCTTATAGAGCATG 464819 >seq1 Length=2087116 Score = 118 bits (130), Expect = 1e-21 Identities = 105/129 (81%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTAT-TCAAGTTGGTGC 155102 |||||||||||||| ||||| |||||| | || |||||||| ||||| |||| ||||| Sbjct 445862 TATGGTCGTGTTGCTCCACGTTCCGGTTTGGCCGTGAAGCACGGTATCTCAA-CAGGTGC 445920 Query 155103 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 155162 ||||| ||||| | ||||| | ||||||||| || || ||||||||||| ||| | || Sbjct 445921 CGGTGTCGTTGATGCAGACTACAGAGGTGAAGTGAAGGTTGTTCTCTTCAACCACAGTGA 445980 Query 155163 CAAAGACTT 155171 ||| ||||| Sbjct 445981 CAAGGACTT 445989 Score = 100 bits (110), Expect = 3e-16 Identities = 275/415 (66%), Gaps = 11/415 (3%) Strand=Plus/Minus Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CG 9336 || |||||||||||||| | ||||||||| | ||| || || ||||| || | Sbjct 1374718 TCGAAACCATCCATCTCAACGAGAAGTTGGTTCAACGTTGCCTCACGCTCATCGTTACCA 1374659 Query 9337 CTGG-CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACA 9395 | || ||||||||| || | | || || | ||||||||| ||||||| |||| Sbjct 1374658 CCGGACATACCACCTTTACCCCTCTCTTTACCAATGGCATCAATTTCATCAACAAAGATG 1374599 Query 9396 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACA 9455 ||| ||| || | || ||| || | ||| ||||| || ||| || ||| Sbjct 1374598 ATAGCTGGAGCCATTGTTCTAGCAGTTTTGAACAAATCACGAACTCTGGAGGCACCAACA 1374539 Query 9456 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 9514 || ||||||||||| ||||| | || | | ||| || | ||| || ||| || || Sbjct 1374538 CCGACAAACATCTCGACAAACTCTGAACCAG-ACACTGAAAGGAAAGGAACACCAGCCTC 1374480 Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9574 ||| || | || || ||||| |||||||| |||||||| ||| | | || ||| Sbjct 1374479 ACCGGCGGTAGCCTTAGCAAGAAGGGTCTTACCTGTACCTGGGGGACCAGACAAGATGGC 1374420 Query 9575 ACCCCGTGGAATCTTGGCGCCA---CTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATC 9631 ||| || |||||||| || ||| || || ||| ||| || | ||| | ||| || Sbjct 1374419 ACCACGAGGAATCTTTGCACCAAGTTTTTCA---TATTTCTGTGGGTTCTTCAAAAACTC 1374363 Query 9632 CACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATCGGTAAAC 9686 |||| || | ||| || || || | ||| || ||||||||| |||| Sbjct 1374362 AACAAATTCCATGATTTCCTCCTTAGCTTCATCACAACCGGCAACATCGGCAAAC 1374308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980615631000