Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq5 194 4e-44 seq7 143 6e-29 seq16 136 9e-27 seq9 102 2e-16 >seq5 Length=1064489 Score = 194 bits (214), Expect = 4e-44 Identities = 176/222 (79%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||||||||||||||| || ||||| ||||| |||| || || Sbjct 816331 TCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 816272 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||||||||||||||| || || ||||||| || ||||| || ||||| || Sbjct 816271 TCTGCCATCTTCGAGCTGCTTACCGGCAAAAATAAGTCTCTGCTGGTCAGGTGGAATACC 816212 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| ||||| || ||||||||| ||||| ||||| || || |||||||| Sbjct 816211 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAGGACTCAACTTCAAG 816152 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || ||||| || || ||||| | |||||| Sbjct 816151 TGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 816110 Score = 176 bits (194), Expect = 1e-38 Identities = 172/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||||||||||||||| || ||||| ||||| |||| | ||| Sbjct 816787 TCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAAAGT 816728 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || ||||||||||| || |||||||||| || ||||| || ||||| || Sbjct 816727 TCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGAATACC 816668 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || ||| ||||| ||||| ||||| || ||| || || || Sbjct 816667 TTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACCTCGAG 816608 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || ||||| || || || || | ||||| Sbjct 816607 TGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 816566 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | |||||| || ||||| || ||||| ||||| |||| || || Sbjct 816559 TCTCAATCTCAAAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 816500 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| ||||||||||| || |||||||||| || ||||| || || || || Sbjct 816499 TCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACC 816440 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || ||| ||||| ||||| || || || || || || || Sbjct 816439 CTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAACCTCGAG 816380 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || ||||| || || || || | ||||| Sbjct 816379 TGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 816338 Score = 140 bits (154), Expect = 7e-28 Identities = 130/165 (79%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | |||||| |||||||| || || || ||||| |||| ||| || Sbjct 816103 TCTCAATCTCAAAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGT 816044 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || ||||||||||| || |||||||||| || || || || || || || Sbjct 816043 TCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGGGATACC 815984 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083 || ||||| ||||| || ||||||||| ||||| ||||| || Sbjct 815983 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGA 815939 >seq7 Length=598726 Score = 143 bits (158), Expect = 6e-29 Identities = 145/189 (77%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||||||||| || || || ||||| || | ||| ||||| || || |||||||||||||| Sbjct 431711 AGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCCTCGAGCTGCTTACC 431770 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 ||||||||||||| || ||||| || || || || || ||||| || || || ||| Sbjct 431771 GGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTT 431830 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 |||||| ||||||||||| || || || || | ||||| ||||| || ||||| || Sbjct 431831 GACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTTACCGGTCAAGGT 431890 Query 195123 TTTTACGAA 195131 || ||||| Sbjct 431891 CTTAACGAA 431899 >seq16 Length=161790 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | || | |||||| |||||||| || ||||| ||||| || | ||| || Sbjct 4567 TCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGT 4508 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || ||||||||||| || |||||||||| || ||||| || || || || Sbjct 4507 TCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACC 4448 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| || || || |||||| || ||||| ||||| ||| || || || | Sbjct 4447 TTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAA 4388 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTT 195148 || | ||||| || || | || || || || | ||||| | ||||| Sbjct 4387 AGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCT-TGGTT 4339 >seq9 Length=581722 Score = 102 bits (112), Expect = 2e-16 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 160637 AATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGT 160696 ||||| || |||| | |||| ||| |||||||| || || |||| |||| ||||||| Sbjct 353476 AATGGTGAATGGACTTTGTTCTCTCCAAATGAAGCACCAGGTCTTGCTGATTGTTATGGT 353535 Query 160697 TCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTG 160756 || ||| || |||||||||| | || || ||||| || | | | |||| || Sbjct 353536 GATGAATTCAAGGCTCTTTATGAGAAGTATGAGAAAGAAGGTCGTGGTAGAAAGACTGTC 353595 Query 160757 AAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTT 160816 ||||| ||| | ||||| || ||||||| ||||| ||| |||| || || Sbjct 353596 AAGGCTCAAAAGTTGTGGTATGCAATCCTTGATGCCCAGACTGAGACTGGTACTCCATTC 353655 Query 160817 ATCGCATACAAGGATGCCATCTGTCG-CAAGAGTAACCAGAAGAACTTTGGAATG 160870 || |||||||||||| | | || |||| ||||||||||||||| || ||| Sbjct 353656 ATGCTTTACAAGGATGCC-TGTAACGAGAAGACTAACCAGAAGAACTTGGGTATG 353709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481244619175