Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq5 194 4e-44
seq7 143 6e-29
seq16 136 9e-27
seq9 102 2e-16
>seq5
Length=1064489
Score = 194 bits (214), Expect = 4e-44
Identities = 176/222 (79%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | ||||||||||||||| || ||||| ||||| |||| || ||
Sbjct 816331 TCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 816272
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||||||||||||||| || || ||||||| || ||||| || ||||| ||
Sbjct 816271 TCTGCCATCTTCGAGCTGCTTACCGGCAAAAATAAGTCTCTGCTGGTCAGGTGGAATACC 816212
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| ||||| || ||||||||| ||||| ||||| || || ||||||||
Sbjct 816211 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAGGACTCAACTTCAAG 816152
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||| || ||||| || || ||||| | ||||||
Sbjct 816151 TGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 816110
Score = 176 bits (194), Expect = 1e-38
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | ||||||||||||||| || ||||| ||||| |||| | |||
Sbjct 816787 TCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAAAGT 816728
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || ||||||||||| || |||||||||| || ||||| || ||||| ||
Sbjct 816727 TCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGAATACC 816668
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || ||| ||||| ||||| ||||| || ||| || || ||
Sbjct 816667 TTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACCTCGAG 816608
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||| || ||||| || || || || | |||||
Sbjct 816607 TGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 816566
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | |||||| || ||||| || ||||| ||||| |||| || ||
Sbjct 816559 TCTCAATCTCAAAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 816500
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| ||||||||||| || |||||||||| || ||||| || || || ||
Sbjct 816499 TCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACC 816440
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||| ||||| ||||| || || || || || || ||
Sbjct 816439 CTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAACCTCGAG 816380
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||||| || ||||| || || || || | |||||
Sbjct 816379 TGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 816338
Score = 140 bits (154), Expect = 7e-28
Identities = 130/165 (79%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | |||||| |||||||| || || || ||||| |||| ||| ||
Sbjct 816103 TCTCAATCTCAAAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGT 816044
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || ||||||||||| || |||||||||| || || || || || || ||
Sbjct 816043 TCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGGGATACC 815984
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083
|| ||||| ||||| || ||||||||| ||||| ||||| ||
Sbjct 815983 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGA 815939
>seq7
Length=598726
Score = 143 bits (158), Expect = 6e-29
Identities = 145/189 (77%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
||||||||| || || || ||||| || | ||| ||||| || || ||||||||||||||
Sbjct 431711 AGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCCTCGAGCTGCTTACC 431770
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
||||||||||||| || ||||| || || || || || ||||| || || || |||
Sbjct 431771 GGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTT 431830
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
|||||| ||||||||||| || || || || | ||||| ||||| || ||||| ||
Sbjct 431831 GACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTTACCGGTCAAGGT 431890
Query 195123 TTTTACGAA 195131
|| |||||
Sbjct 431891 CTTAACGAA 431899
>seq16
Length=161790
Score = 136 bits (150), Expect = 9e-27
Identities = 169/230 (73%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| | || | |||||| |||||||| || ||||| ||||| || | ||| ||
Sbjct 4567 TCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGT 4508
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || ||||||||||| || |||||||||| || ||||| || || || ||
Sbjct 4507 TCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACC 4448
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||||||||| || || || |||||| || ||||| ||||| ||| || || || |
Sbjct 4447 TTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAA 4388
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTT 195148
|| | ||||| || || | || || || || | ||||| | |||||
Sbjct 4387 AGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCT-TGGTT 4339
>seq9
Length=581722
Score = 102 bits (112), Expect = 2e-16
Identities = 165/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 160637 AATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGT 160696
||||| || |||| | |||| ||| |||||||| || || |||| |||| |||||||
Sbjct 353476 AATGGTGAATGGACTTTGTTCTCTCCAAATGAAGCACCAGGTCTTGCTGATTGTTATGGT 353535
Query 160697 TCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTG 160756
|| ||| || |||||||||| | || || ||||| || | | | |||| ||
Sbjct 353536 GATGAATTCAAGGCTCTTTATGAGAAGTATGAGAAAGAAGGTCGTGGTAGAAAGACTGTC 353595
Query 160757 AAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTT 160816
||||| ||| | ||||| || ||||||| ||||| ||| |||| || ||
Sbjct 353596 AAGGCTCAAAAGTTGTGGTATGCAATCCTTGATGCCCAGACTGAGACTGGTACTCCATTC 353655
Query 160817 ATCGCATACAAGGATGCCATCTGTCG-CAAGAGTAACCAGAAGAACTTTGGAATG 160870
|| |||||||||||| | | || |||| ||||||||||||||| || |||
Sbjct 353656 ATGCTTTACAAGGATGCC-TGTAACGAGAAGACTAACCAGAAGAACTTGGGTATG 353709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481244619175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |