Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq6 239 5e-58
seq9 217 2e-51
>seq6
Length=680632
Score = 239 bits (264), Expect = 5e-58
Identities = 416/599 (69%), Gaps = 7/599 (1%)
Strand=Plus/Minus
Query 18951 AAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGA 19010
||||| |||||| ||||| ||| || | || || || | | ||||| ||||||||
Sbjct 382403 AAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGA 382344
Query 19011 AAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCC 19070
|| || ||||| ||||||| ||||| || || |||||||| ||||| ||||| || ||
Sbjct 382343 GAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACC 382284
Query 19071 AGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAG-CAT 19129
||| ||||| |||||||| || || ||||| ||||| ||||| || || ||| || | |
Sbjct 382283 AGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCG-AACAAGGCTT 382225
Query 19130 CATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCT 19189
| | || ||||||| ||| ||||||||||||||||| || | |||||| || ||||
Sbjct 382224 CTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCT 382165
Query 19190 CTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATA 19249
| || | |||||| | |||| | || | || ||| || | ||| | || ||||| |
Sbjct 382164 CAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCAATCAAGA 382105
Query 19250 AACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTG 19309
| ||| | || || ||||| || || || || || || ||||| ||||| | |
Sbjct 382104 GAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAG 382045
Query 19310 CTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCAT 19369
|||||| || || || || | | || | || ||||| || |||||||| || || |
Sbjct 382044 CTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGT 381985
Query 19370 CACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCA-TCTGAGGTTAAT 19428
|| ||| ||||| || || | ||| | || || |||| ||| | | |||
Sbjct 381984 CAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTCA-TTCAAT 381926
Query 19429 ---GTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAA 19485
| |||||||||| | ||| ||||| ||||| | || ||| | ||||| ||||||
Sbjct 381925 CTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAAGAA 381866
Query 19486 GCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544
|| || || || || || | ||| || ||| | || | || || || | ||||||
Sbjct 381865 GCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAAGAACAAA 381807
Score = 237 bits (262), Expect = 2e-57
Identities = 391/560 (70%), Gaps = 4/560 (1%)
Strand=Plus/Minus
Query 47958 TTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATA 48017
||||| ||||||||||| | |||||| | | ||||| || ||||| || |||||
Sbjct 464878 TTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCATG 464819
Query 48018 AAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTT 48077
||||| |||||||| | |||||||| | ||| || | ||| | || ||||||
Sbjct 464818 AAAGGACCACCAGTTTCAACTTGAGATTCCAAGATTGAGTGCCATAACTTCTGAGCCTTA 464759
Query 48078 ATAA-CAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATC 48136
|| | || | | | | || | || ||||| ||| | | ||||||| ||
Sbjct 464758 ATCTTCTTCTTTGCCAATCCT-TCCTTCTCATATTTGTGATACAGTTGAACAAATTCTTC 464700
Query 48137 CCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATC 48196
|||||||| | || || |||||| |||| |||| | ||| |||| || |||||
Sbjct 464699 ACCATACACCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTCTTCATC 464640
Query 48197 ATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGT 48256
|| | ||| | ||| |||| |||||| ||||| ||||| ||| ||||| | ||
Sbjct 464639 TTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAAAACAAATCACGAGC 464580
Query 48257 TCTTAGTTCTTCATTGCCACTATTCCTT-TTAAGTTCAAGAAAGTCCATTATATCAGCAT 48315
||| | ||||| || ||| |||| | ||||||| |||||| ||||| | ||||||||
Sbjct 464579 TCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAA-TCCATCACATCAGCAT 464521
Query 48316 GCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATAT 48375
|||||||||| ||||| || || | | ||||||||| |||||||| |||||||| | ||
Sbjct 464520 GCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCAACAT 464461
Query 48376 ATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGG 48435
|||| || || || ||| | ||||| | ||| || || ||||| ||||| ||||||| |
Sbjct 464460 ATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTACCATTTG 464401
Query 48436 TTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTG 48495
||| | ||| || ||| | ||||| || || || | ||| |||||||| |
Sbjct 464400 ATCCGGCAATGTATGCACCAGTGGCTCTAATGCTAGATATATGTAGACCGATACCACCAG 464341
Query 48496 CCATTTTAGATATTAGAGCA 48515
| || || |||| ||||
Sbjct 464340 CAGCCTTCGAGATTAAAGCA 464321
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 47018 TAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAA 47077
||| ||||||||||||||||||| ||| |||| |||||||||||||| ||| |
Sbjct 465848 TAAGTAATACATACCAGTCTTTAGTCCTTGCTTCCAGCCATAGAAATGCATCGAAGTGAG 465789
Query 47078 -TTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATG 47136
||| | | || | || || ||||| || || ||||| |||||||||||||
Sbjct 465788 CTTTCGGA-AAGTTGGATCCCTCATATGGATGTTTGTGGATTGGGATTGATCAATAAATG 465730
Query 47137 CACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTAT 47196
||||| || || ||| | |||||| | | |||||| || ||||||||||| ||
Sbjct 465729 GTCCTCTCTCGGCACACATCTGTAAAATCCCACGTTGTGGGATTTCCCATACTGTACGAT 465670
Query 47197 AAATTTGTTTAATGTCTTCTGGGA 47220
||| |||| | || |||||||
Sbjct 465669 GAATCAGTTTCAAGTTCTCTGGGA 465646
>seq9
Length=581722
Score = 217 bits (240), Expect = 2e-51
Identities = 860/1341 (64%), Gaps = 45/1341 (3%)
Strand=Plus/Minus
Query 47879 TGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTC 47938
||| || || || | ||||| ||||| || || | ||| | || |||| | || ||
Sbjct 353793 TGCAATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTC 353734
Query 47939 AGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACA 47998
| ||| | ||| | | ||||| ||||||| || | || ||| | | ||||||
Sbjct 353733 ACAACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACA 353674
Query 47999 TGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTT 48058
|| |||||||||||||| || || || ||||| || |||| | |||| ||| | |
Sbjct 353673 GGCATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATA 353614
Query 48059 CCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATA 48118
||| | | |||||| | | |||| | | || | || || || |||
Sbjct 353613 CCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATA 353554
Query 48119 TAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACAT 48178
| || |||||||| ||||| || | | | || || |||||| ||| | |
Sbjct 353553 AAGAGCCTTGAATTCATCACCATAACAATCAGCAAGACCTGGTGCTTCATTTGGAGAGAA 353494
Query 48179 CAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGC 48238
||| | ||| || ||| | | || | ||| || | ||| || ||||| | ||
Sbjct 353493 CAAAGTCCATTCACCATTAGACTCAACACGTTCCATGAACAAATCAGGGATCCACAATGC 353434
Query 48239 TATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAA 48298
| || ||||| | || ||| | ||||| || || |||| || ||| || | ||
Sbjct 353433 TGGGAACAAATCACGAGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAA 353374
Query 48299 GTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATT 48358
|| | ||||| || ||||||||||| ||||| | || | | |||| |||| || ||
Sbjct 353373 ATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTT 353314
Query 48359 ACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACC 48418
||| ||||| || | || | ||||| |||||| | || | | |||||| | | |||
Sbjct 353313 ACCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACC 353254
Query 48419 ATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TG 48477
|| || |||| || || || | ||| ||| || ||||||| | ||| || ||
Sbjct 353253 GTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCTGTAGCTCTAACGTTATGGATGTG 353194
Query 48478 AAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAA 48537
|| ||| |||||||| || | || || || | ||||| |||| | || ||||| |
Sbjct 353193 TAA-ACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGA 353135
Query 48538 TTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGAC 48597
| || || || ||| ||| ||||| | || |||||| ||||| || || ||
Sbjct 353134 TACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTG 353075
Query 48598 AAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATT 48657
|| || | || || || |||||||| || || | || || |||| || | | |
Sbjct 353074 GGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGT 353015
Query 48658 TATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTA 48717
|||| || |||||||| || | ||||| | ||| ||||| |||| || | ||| |
Sbjct 353014 TATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCATGA 352955
Query 48718 ACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCA 48777
|| || || || | |||| | | ||| ||| | ||| | || ||| | ||||
Sbjct 352954 TCAAATGCTGTGGACGTTCAGCGACTTTACCATTAACACGCAACAAGTAAGATCTCTCCA 352895
Query 48778 ATGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGA--- 48832
|||| || |||||||| ||||| || ||||| || |||| | || || | ||
Sbjct 352894 ATGTCTTGAAACCAAAGTAGTTATAGTTGAAA--TCTCTATCGTAGATGATGGCAGAGTC 352837
Query 48833 -ATTTATTCTTT----CCTT-----ATGT------TT---ATATACTACATC----CAT- 48868
| | ||||| ||| |||| || || || ||||| ||
Sbjct 352836 CAACTCGTCTTTGAACTCTTGAACAATGTCATAAGTTTCCTTAGACAACATCGGAGAATG 352777
Query 48869 TACAT---TTTTTGATATAATTGATTCCTTGTAAAGATCTTCTACAACATCACTAAATAt 48925
| || | |||| |||| | |||||||| ||||| |||||| | ||
Sbjct 352776 GAGATCGGTCTTTGGGTTAAT---GTAGTTGTAAAGCTCTTCGACAACAGAAGAGAACTG 352720
Query 48926 tttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATC 48985
||| | |||| ||||| | |||||| || | |||||||||||||| ||||||| ||
Sbjct 352719 TTTAGTGGTTTGCTTATGCAAATTAGAGATGGCAATTCTAGCAGCTAAAGTAGCATAGTC 352660
Query 48986 TGGATGAATTGTTGTACATGTA-CTAGATATTTCTGCTGCTAATATATCTAATTCTTTAG 49044
|||||||| || || ||| || | | | || || || || |||| || || |||
Sbjct 352659 TGGATGAACAGTAGT-CATATAGGCACAAGTCTCAGCAGCCAAGTTATCCAACTCGATAG 352601
Query 49045 TAGTTACACCTGTATATATTCCTTGAATAA--CTTTCATTGCTATATTTACTGGATCTAT 49102
| || |||||| ||| | || || | |||| | || || || || | ||| ||
Sbjct 352600 TGGTGACACCTTCATAAACACCAGAGATGATTCTTTGAGTG--ATCTTAACGGCATCAAT 352543
Query 49103 ATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGATGTAATTTTATCAAACAT 49162
||| || ||| || |||||||||| | | ||||||| |||||| ||||||||| |
Sbjct 352542 ATGTTCTGGATCAAGACCATAACATAGTCTAGAGATTCTAGCTGTAATCTTATCAAACTT 352483
Query 49163 TATATTCTCTTTACGACCGTC 49183
| ||| |||||||||
Sbjct 352482 GACGGGCTCACGACGACCGTC 352462
Score = 98.7 bits (108), Expect = 1e-15
Identities = 163/233 (70%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072
|||| ||||| |||||||||||||| ||||| |||| || ||||| ||||||
Sbjct 354680 GTTCTCAAATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAG 354621
Query 47073 GTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATA 47132
|| || ||| | | || || ||| ||||| || | ||||||| ||||||||
Sbjct 354620 GTCAACTTACCCATAGTTGGAGCTCTAATGTGAATGTTCAAAGATTGAGATTGATCAATG 354561
Query 47133 AATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTT 47192
|| ||| | | |||||| |||||||| | ||| | |||| | |||||||| || ||
Sbjct 354560 AAAGCAGCACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTCCCAAACGGTC 354501
Query 47193 TTATAAATTTGTTTAATGTCTTCTGGGA-GATTAGTA--TTTTGAATAGATCC 47242
|| || | | ||| | || | ||| | | || ||| ||||||||||| ||
Sbjct 354500 TTGTACAAATCTTTCAATTCCTTTGGAATGTTTGGTAAGTTTTGAATAGAACC 354448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108624341000
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