Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6 188 6e-42 seq7 131 1e-24 seq5 105 5e-17 seq9 100 2e-15 seq3 89.7 4e-12 seq10 87.8 1e-11 >seq6 Length=680632 Score = 188 bits (208), Expect = 6e-42 Identities = 558/847 (66%), Gaps = 20/847 (2%) Strand=Plus/Minus Query 551755 TCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAG 551814 |||| |||||| ||||| || |||||| ||| || |||| | ||||| || | Sbjct 307073 TCGAGGATGGTATCTTTGAGGTTAAAGCTACCGCTGGTGACACTCACTTGGGTGGTGAGG 307014 Query 551815 ATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGT 551872 |||| ||||| | || || | || || |||| || || || |||| |||||| Sbjct 307013 ATTTCGATAACAAGCTCGTTGACCACT-TG-GTTGCTGAGTTCAAGAGAAAGAACAAAAA 306956 Query 551873 TGATCTATCTACATCTGCCAAAGCTCTTCGTC--GTCTAAGAACTGCTTGCGAAAGAGCC 551930 ||| ||| || | ||| || |||| | | | ||||||||| || |||||| Sbjct 306955 GGAT--ATCACCACCAACCAGAGATCTTTGAGAAGATTGAGAACTGCTGCTGAGAGAGCC 306898 Query 551931 AAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGA 551990 || || || | || ||| | |||| || ||||||| | || || || | ||||| Sbjct 306897 AAGAGAACTTTGTCTTCTTCTGCTCAGGCCTCTATTGAGATTGACTCTTTGTACGAGGGT 306838 Query 551991 ATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTT 552050 ||||| | | || |||| | || |||| ||| || || ||||| || |||||| Sbjct 306837 ATTGACTTCTACACTTCTATCACCAGAGCCAGATTCGAGGAGCTTTGTGCTTCCCTCTTT 306778 Query 552051 AGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAA 552110 ||| || | || ||||| || | || || ||||| || |||| || ||| | Sbjct 306777 AGATCCACTTTGGACCCAGTCGAGAAGGTCTTGAGAGACTCTTCCCTTGACAAGTCCCAG 306718 Query 552111 GTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTA 552170 || | || ||||| ||||||||||| ||||| |||||||| || ||| | | | | Sbjct 306717 GTTGACGAGATTGTCCTTGTTGGTGGTTCTACCAGAATTCCAAAGGTTC---AGAAGCTC 306661 Query 552171 AGTTCT---TATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTT 552227 |||| | ||||| ||||| | ||| | |||| ||||||||||||||| Sbjct 306660 GTTTCTGAGTTCTTCAACGGTAAGGAGCCAAACAGATCCATTAACCCAGATGAGGCTGTT 306601 Query 552228 GCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA-AACTGATGAAAAACT-AC 552285 || || |||||||| |||| || ||||| | |||| | | | | || ||| | Sbjct 306600 GCTTACGGTGCCGCTGTTCAGGCTGCTATCTTGACTGGTGACCAGTCTTCCAAGACTCAG 306541 Query 552286 AAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTA 552345 | | |||| ||| |||||| |||| | || |||||| | || || | ||| ||| Sbjct 306540 GACCTCTTGTTGTTG--GATGTTGCTCCATTGTCCCTTGGTATTGAGACCGCTGGTGGTG 306483 Query 552346 TTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTT- 552404 | ||||| || || || ||||| ||||||| || || || ||| | | ||| Sbjct 306482 TCATGACCAAGCTCATTCCAAGAAACTCTACTATCCCAACCAAGAAGTCT-GAGACTTTC 306424 Query 552405 TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAA 552464 || || || | || || || | | ||| ||||| | ||||| || || ||| Sbjct 306423 TCCACTTACGCTGACAACCAGCCAGGTGTCTTGATTCAGGTCTTTGAGGGTGAGAGAGCC 306364 Query 552465 TTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCT 552524 |||||||| || || || |||| || | || ||||| || || ||||| Sbjct 306363 AGAACTAAAGACAACAACTTGCTCGGTAAGTTCGAGTTGTCTGGTATCCCACCAGCTCCA 306304 Query 552525 CGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTG 552584 | || || || || ||||| |||||||||||||| |||||||| || |||||||| || Sbjct 306303 AGAGGTGTTCCACAGATTGAGGTTACTTTCGATATTGATGCCAACGGTATTTTGAACGTT 306244 Query 552585 ACTGCTT 552591 | |||| Sbjct 306243 TCCGCTT 306237 >seq7 Length=598726 Score = 131 bits (144), Expect = 1e-24 Identities = 320/479 (67%), Gaps = 6/479 (1%) Strand=Plus/Plus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || || ||||| || || |||||| | || |||||||| || ||| | || || Sbjct 439394 GTTGAGATCATCGCCAACGACCAGGGTAACCGTACCACTCCATCGTACGTTGCCTTTACC 439453 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||| | | | |||||||||| || || ||||||| | || || | || Sbjct 439454 GACACTGAGCGTCTCATTGGTGATGCTGCTAAGAATCAAGCTGCCATGAACCCAAAGAAC 439513 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | ||||| ||||| ||||| ||||| | | ||| | || | || | Sbjct 439514 ACCGTCTTTGACGCTAAGCGTTTGATTGGCCGTAAGTTTGACGACCCAGAAGTCACCACC 439573 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||| ||||| | || ||| | |||| || ||| || || | ||||| | | Sbjct 439574 GATGCTAAGCACTTCCCATTCAAGGTTGTCAACCAGGGTGGTAAGCCAAAGATTGAGGTT 439633 Query 550292 -ACTCATGAAGGATCTGTTAAACAATTTT-CACCAGAACAAATTTCATCTATGGTTTTAA 550349 | | | |||| | | ||| | ||| |||| ||| | || || || ||||| | Sbjct 439634 GAGT--TCAAGGGTGAGACAAAGACTTTCACACCGGAAGAGATCTCTTCAATGGTGCTCG 439691 Query 550350 TGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 | || ||||| | || ||| ||| | | | ||| | || | |||||| || || Sbjct 439692 TCAAGATGAAGGAGACCGCCGAGT-CATACCTCGGTTCCGCTGTCAAGGATGCTGTCATC 439750 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| ||||| || || || |||||||| | ||||| ||||| ||||| || | ||| Sbjct 439751 ACTGTTCCAGCTTACTTCAACGACTCACAGAGACAAGCAACTAAGGATGCCGGTCTCATT 439810 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||||| | || ||||||||||| ||||| || || ||||| ||||| |||| || || Sbjct 439811 GCTGGTTTGAACGTTCTTCGTATCATCAACGAGCCAACTGCCGCTGCTATTGCCTACGG 439869 >seq5 Length=1064489 Score = 105 bits (116), Expect = 5e-17 Identities = 136/185 (74%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| ||||| || | || ||||| |||||| || || || ||||||||||||||||| Sbjct 816292 AATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCGAGCTGCTTACCGGCAAAAATAAGTCT 816233 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 ||||| ||||| ||||| || || || || ||||| || || || ||||| || Sbjct 816232 CTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGT 816173 Query 563412 ATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | || | | ||| || |||| ||| |||||||| | || || |||||||||| Sbjct 816172 GTCGGAG-GACTCAACTTCAAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTT 816114 Query 563471 GCATA 563475 ||||| Sbjct 816113 GCATA 816109 >seq9 Length=581722 Score = 100 bits (110), Expect = 2e-15 Identities = 250/380 (66%), Gaps = 0/380 (0%) Strand=Plus/Minus Query 684101 TTGATCAATAAATGGTGCACGTTCAGCAGCCATTTCTATGATAGATTTTTGAGGTATTTC 684160 ||||||||| || | ||||| ||||||||||| || ||||||| ||||||| || || Sbjct 354570 TTGATCAATGAAAGCAGCACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTC 354511 Query 684161 CCAAACAGTGCGATAAATATCTTTAATATGCTGGGGAATAGTTGGTATTTTAGAAATTGA 684220 |||||| || || | |||||| | | || ||||| |||||| || ||| || Sbjct 354510 CCAAACGGTCTTGTACAAATCTTTCAATTCCTTTGGAATGTTTGGTAAGTTTTGAATAGA 354451 Query 684221 TCCTCGATAATATTTGATAAGATCAATCATATCCGAATTCCAAAGACCTAAATCAATTAA 684280 || || | | |||| || ||||| || ||||| ||| ||||||| || Sbjct 354450 ACCGTTATCAGAGATGATGTGACTCTTCATAGAGTCATCCCAAACACCCAAATCAACCAA 354391 Query 684281 ATCCTGAACTAAATATTTATTAATGACATAATAATCTCCAGCTAAAGTACTTCTTGAATA 684340 ||| ||| |||||| |||| | | | || ||||| | || | || || Sbjct 354390 ATCACGAAGCAAATATGGGTTAACAATCTGGAATTCACCAGCAAGGACACGACGAGAGTA 354331 Query 684341 AATATTTTCAGTAAAGGGCTCGATGCACTCATTGTAACCCATGATTTGAGAAGTACTTGC 684400 ||| || ||| | || |||| || || |||||||||| |||||||||||| || Sbjct 354330 AATGTTAGAAGTGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGC 354271 Query 684401 TGTGGGCATACAAGTAGTTGTTAAACTATTTCTAACACCATATTTTTGGATATCTATCAT 684460 || ||||| || | ||| ||||| | ||| || || ||||| | | Sbjct 354270 AGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTCAAACCGTACTTGACAATATCAGCCTT 354211 Query 684461 CAAACTATCCCAATCCCACA 684480 | | ||||||||||||||| Sbjct 354210 AAGAGTATCCCAATCCCACA 354191 >seq3 Length=1228753 Score = 89.7 bits (98), Expect = 4e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 550331 ATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA 550390 || || ||||||||||| | || ||||| | | || ||| ||||||| | Sbjct 418750 ATCTCTTCTATGGTTTTGACCAAGATGAAGGAGATTGCTGAGGCTAAGATTGGTCAGAAG 418691 Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||| | | || || || || || ||||| || || || || | || ||||| |||||| Sbjct 418690 GTTGAGAAGGCTGTTATCACCGTCCCAGCTTACTTCAACGATGCTCAGCGTCAGGCTACT 418631 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || |||||||| ||||| || | || |||||| | |||||||| || || ||||| Sbjct 418630 AAGGATGCTGGTGCCATTGCCGGTTTGAACGTTCTTAGAATTATCAACGAGCCAACTGCC 418571 Query 550511 GCTGCACTTGCATATGGACTTG 550532 ||||| |||| || || |||| Sbjct 418570 GCTGCTATTGCTTACGGTCTTG 418549 >seq10 Length=428028 Score = 87.8 bits (96), Expect = 1e-11 Identities = 134/185 (72%), Gaps = 7/185 (4%) Strand=Plus/Plus Query 552061 TTGAA-CCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAA 552119 ||||| || || || || ||||| || || || || | || ||| | | |||| Sbjct 130410 TTGAAGCCTGTGGAGCAGGTTTTGAGTGACTCTGGTATGAAGAAGTCCGACATTGATGAC 130469 Query 552120 ATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTA 552178 |||| ||||||||||| ||||| |||||||| || || | || || || || ||||| Sbjct 130470 GTTGTCCTTGTTGGTGGTTCTACTAGAATTCCAAAGATCCAGGAGTTGCTTGAG-TCTTA 130528 Query 552179 TTTCAATGGTAAAAAATTAAATGAAAGT--GTTAATCCAGATGAGGCTGTTGCCTATGGT 552236 ||||||||||| || | | |||| | || |||||||||||||||||||||||| Sbjct 130529 CTTCAATGGTAAGAAGGT--TTCCAAGTCCATCAACCCAGATGAGGCTGTTGCCTATGGT 130586 Query 552237 GCCGC 552241 || || Sbjct 130587 GCTGC 130591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029294677887250