Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq6 188 6e-42
seq7 131 1e-24
seq5 105 5e-17
seq9 100 2e-15
seq3 89.7 4e-12
seq10 87.8 1e-11
>seq6
Length=680632
Score = 188 bits (208), Expect = 6e-42
Identities = 558/847 (66%), Gaps = 20/847 (2%)
Strand=Plus/Minus
Query 551755 TCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAG 551814
|||| |||||| ||||| || |||||| ||| || |||| | ||||| || |
Sbjct 307073 TCGAGGATGGTATCTTTGAGGTTAAAGCTACCGCTGGTGACACTCACTTGGGTGGTGAGG 307014
Query 551815 ATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGT 551872
|||| ||||| | || || | || || |||| || || || |||| ||||||
Sbjct 307013 ATTTCGATAACAAGCTCGTTGACCACT-TG-GTTGCTGAGTTCAAGAGAAAGAACAAAAA 306956
Query 551873 TGATCTATCTACATCTGCCAAAGCTCTTCGTC--GTCTAAGAACTGCTTGCGAAAGAGCC 551930
||| ||| || | ||| || |||| | | | ||||||||| || ||||||
Sbjct 306955 GGAT--ATCACCACCAACCAGAGATCTTTGAGAAGATTGAGAACTGCTGCTGAGAGAGCC 306898
Query 551931 AAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGA 551990
|| || || | || ||| | |||| || ||||||| | || || || | |||||
Sbjct 306897 AAGAGAACTTTGTCTTCTTCTGCTCAGGCCTCTATTGAGATTGACTCTTTGTACGAGGGT 306838
Query 551991 ATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTT 552050
||||| | | || |||| | || |||| ||| || || ||||| || ||||||
Sbjct 306837 ATTGACTTCTACACTTCTATCACCAGAGCCAGATTCGAGGAGCTTTGTGCTTCCCTCTTT 306778
Query 552051 AGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAA 552110
||| || | || ||||| || | || || ||||| || |||| || ||| |
Sbjct 306777 AGATCCACTTTGGACCCAGTCGAGAAGGTCTTGAGAGACTCTTCCCTTGACAAGTCCCAG 306718
Query 552111 GTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTA 552170
|| | || ||||| ||||||||||| ||||| |||||||| || ||| | | | |
Sbjct 306717 GTTGACGAGATTGTCCTTGTTGGTGGTTCTACCAGAATTCCAAAGGTTC---AGAAGCTC 306661
Query 552171 AGTTCT---TATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTT 552227
|||| | ||||| ||||| | ||| | |||| |||||||||||||||
Sbjct 306660 GTTTCTGAGTTCTTCAACGGTAAGGAGCCAAACAGATCCATTAACCCAGATGAGGCTGTT 306601
Query 552228 GCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA-AACTGATGAAAAACT-AC 552285
|| || |||||||| |||| || ||||| | |||| | | | | || ||| |
Sbjct 306600 GCTTACGGTGCCGCTGTTCAGGCTGCTATCTTGACTGGTGACCAGTCTTCCAAGACTCAG 306541
Query 552286 AAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTA 552345
| | |||| ||| |||||| |||| | || |||||| | || || | ||| |||
Sbjct 306540 GACCTCTTGTTGTTG--GATGTTGCTCCATTGTCCCTTGGTATTGAGACCGCTGGTGGTG 306483
Query 552346 TTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTT- 552404
| ||||| || || || ||||| ||||||| || || || ||| | | |||
Sbjct 306482 TCATGACCAAGCTCATTCCAAGAAACTCTACTATCCCAACCAAGAAGTCT-GAGACTTTC 306424
Query 552405 TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAA 552464
|| || || | || || || | | ||| ||||| | ||||| || || |||
Sbjct 306423 TCCACTTACGCTGACAACCAGCCAGGTGTCTTGATTCAGGTCTTTGAGGGTGAGAGAGCC 306364
Query 552465 TTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCT 552524
|||||||| || || || |||| || | || ||||| || || |||||
Sbjct 306363 AGAACTAAAGACAACAACTTGCTCGGTAAGTTCGAGTTGTCTGGTATCCCACCAGCTCCA 306304
Query 552525 CGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTG 552584
| || || || || ||||| |||||||||||||| |||||||| || |||||||| ||
Sbjct 306303 AGAGGTGTTCCACAGATTGAGGTTACTTTCGATATTGATGCCAACGGTATTTTGAACGTT 306244
Query 552585 ACTGCTT 552591
| ||||
Sbjct 306243 TCCGCTT 306237
>seq7
Length=598726
Score = 131 bits (144), Expect = 1e-24
Identities = 320/479 (67%), Gaps = 6/479 (1%)
Strand=Plus/Plus
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||| || || ||||| || || |||||| | || |||||||| || ||| | || ||
Sbjct 439394 GTTGAGATCATCGCCAACGACCAGGGTAACCGTACCACTCCATCGTACGTTGCCTTTACC 439453
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| ||||| | | | |||||||||| || || ||||||| | || || | ||
Sbjct 439454 GACACTGAGCGTCTCATTGGTGATGCTGCTAAGAATCAAGCTGCCATGAACCCAAAGAAC 439513
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
|| | ||||| ||||| ||||| ||||| | | ||| | || | || |
Sbjct 439514 ACCGTCTTTGACGCTAAGCGTTTGATTGGCCGTAAGTTTGACGACCCAGAAGTCACCACC 439573
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291
||| ||||| | || ||| | |||| || ||| || || | ||||| | |
Sbjct 439574 GATGCTAAGCACTTCCCATTCAAGGTTGTCAACCAGGGTGGTAAGCCAAAGATTGAGGTT 439633
Query 550292 -ACTCATGAAGGATCTGTTAAACAATTTT-CACCAGAACAAATTTCATCTATGGTTTTAA 550349
| | | |||| | | ||| | ||| |||| ||| | || || || ||||| |
Sbjct 439634 GAGT--TCAAGGGTGAGACAAAGACTTTCACACCGGAAGAGATCTCTTCAATGGTGCTCG 439691
Query 550350 TGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408
| || ||||| | || ||| ||| | | | ||| | || | |||||| || ||
Sbjct 439692 TCAAGATGAAGGAGACCGCCGAGT-CATACCTCGGTTCCGCTGTCAAGGATGCTGTCATC 439750
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| ||||| || || || |||||||| | ||||| ||||| ||||| || | |||
Sbjct 439751 ACTGTTCCAGCTTACTTCAACGACTCACAGAGACAAGCAACTAAGGATGCCGGTCTCATT 439810
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527
||||| | || ||||||||||| ||||| || || ||||| ||||| |||| || ||
Sbjct 439811 GCTGGTTTGAACGTTCTTCGTATCATCAACGAGCCAACTGCCGCTGCTATTGCCTACGG 439869
>seq5
Length=1064489
Score = 105 bits (116), Expect = 5e-17
Identities = 136/185 (74%), Gaps = 2/185 (1%)
Strand=Plus/Minus
Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351
||| ||||| || | || ||||| |||||| || || || |||||||||||||||||
Sbjct 816292 AATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCGAGCTGCTTACCGGCAAAAATAAGTCT 816233
Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411
||||| ||||| ||||| || || || || ||||| || || || ||||| ||
Sbjct 816232 CTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGT 816173
Query 563412 ATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470
|| | | || | | ||| || |||| ||| |||||||| | || || ||||||||||
Sbjct 816172 GTCGGAG-GACTCAACTTCAAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTT 816114
Query 563471 GCATA 563475
|||||
Sbjct 816113 GCATA 816109
>seq9
Length=581722
Score = 100 bits (110), Expect = 2e-15
Identities = 250/380 (66%), Gaps = 0/380 (0%)
Strand=Plus/Minus
Query 684101 TTGATCAATAAATGGTGCACGTTCAGCAGCCATTTCTATGATAGATTTTTGAGGTATTTC 684160
||||||||| || | ||||| ||||||||||| || ||||||| ||||||| || ||
Sbjct 354570 TTGATCAATGAAAGCAGCACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTC 354511
Query 684161 CCAAACAGTGCGATAAATATCTTTAATATGCTGGGGAATAGTTGGTATTTTAGAAATTGA 684220
|||||| || || | |||||| | | || ||||| |||||| || ||| ||
Sbjct 354510 CCAAACGGTCTTGTACAAATCTTTCAATTCCTTTGGAATGTTTGGTAAGTTTTGAATAGA 354451
Query 684221 TCCTCGATAATATTTGATAAGATCAATCATATCCGAATTCCAAAGACCTAAATCAATTAA 684280
|| || | | |||| || ||||| || ||||| ||| ||||||| ||
Sbjct 354450 ACCGTTATCAGAGATGATGTGACTCTTCATAGAGTCATCCCAAACACCCAAATCAACCAA 354391
Query 684281 ATCCTGAACTAAATATTTATTAATGACATAATAATCTCCAGCTAAAGTACTTCTTGAATA 684340
||| ||| |||||| |||| | | | || ||||| | || | || ||
Sbjct 354390 ATCACGAAGCAAATATGGGTTAACAATCTGGAATTCACCAGCAAGGACACGACGAGAGTA 354331
Query 684341 AATATTTTCAGTAAAGGGCTCGATGCACTCATTGTAACCCATGATTTGAGAAGTACTTGC 684400
||| || ||| | || |||| || || |||||||||| |||||||||||| ||
Sbjct 354330 AATGTTAGAAGTGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGC 354271
Query 684401 TGTGGGCATACAAGTAGTTGTTAAACTATTTCTAACACCATATTTTTGGATATCTATCAT 684460
|| ||||| || | ||| ||||| | ||| || || ||||| | |
Sbjct 354270 AGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTCAAACCGTACTTGACAATATCAGCCTT 354211
Query 684461 CAAACTATCCCAATCCCACA 684480
| | |||||||||||||||
Sbjct 354210 AAGAGTATCCCAATCCCACA 354191
>seq3
Length=1228753
Score = 89.7 bits (98), Expect = 4e-12
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 550331 ATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA 550390
|| || ||||||||||| | || ||||| | | || ||| ||||||| |
Sbjct 418750 ATCTCTTCTATGGTTTTGACCAAGATGAAGGAGATTGCTGAGGCTAAGATTGGTCAGAAG 418691
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||| | | || || || || || ||||| || || || || | || ||||| ||||||
Sbjct 418690 GTTGAGAAGGCTGTTATCACCGTCCCAGCTTACTTCAACGATGCTCAGCGTCAGGCTACT 418631
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|| |||||||| ||||| || | || |||||| | |||||||| || || |||||
Sbjct 418630 AAGGATGCTGGTGCCATTGCCGGTTTGAACGTTCTTAGAATTATCAACGAGCCAACTGCC 418571
Query 550511 GCTGCACTTGCATATGGACTTG 550532
||||| |||| || || ||||
Sbjct 418570 GCTGCTATTGCTTACGGTCTTG 418549
>seq10
Length=428028
Score = 87.8 bits (96), Expect = 1e-11
Identities = 134/185 (72%), Gaps = 7/185 (4%)
Strand=Plus/Plus
Query 552061 TTGAA-CCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAA 552119
||||| || || || || ||||| || || || || | || ||| | | ||||
Sbjct 130410 TTGAAGCCTGTGGAGCAGGTTTTGAGTGACTCTGGTATGAAGAAGTCCGACATTGATGAC 130469
Query 552120 ATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTA 552178
|||| ||||||||||| ||||| |||||||| || || | || || || || |||||
Sbjct 130470 GTTGTCCTTGTTGGTGGTTCTACTAGAATTCCAAAGATCCAGGAGTTGCTTGAG-TCTTA 130528
Query 552179 TTTCAATGGTAAAAAATTAAATGAAAGT--GTTAATCCAGATGAGGCTGTTGCCTATGGT 552236
||||||||||| || | | |||| | || ||||||||||||||||||||||||
Sbjct 130529 CTTCAATGGTAAGAAGGT--TTCCAAGTCCATCAACCCAGATGAGGCTGTTGCCTATGGT 130586
Query 552237 GCCGC 552241
|| ||
Sbjct 130587 GCTGC 130591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029294677887250
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