Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq16 93.3 3e-14 seq5 91.5 1e-13 >seq16 Length=161790 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 |||||| || || ||| ||| || ||||| ||||| ||||| || ||| | | || || Sbjct 4555 CACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACCATCCTC 4496 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 | ||||||||||||||| || |||| ||| || || | || | || || ||||| Sbjct 4495 AAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTTGTCCTG 4436 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 ||||| || ||| | | || || || | ||| ||||||| || || || || Sbjct 4435 GATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGATGGTCTT 4376 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 ||||| | || || ||||| ||||||||| || Sbjct 4375 ACCCGTGAGGGTCTTAACAAAGATCTGCATCTTG 4342 >seq5 Length=1064489 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || ||| ||| || ||||| ||||| || || || ||| | || Sbjct 816322 CAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATC 816263 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || | ||||||||||||||| || |||| ||| || || | |||| ||||||||||| Sbjct 816262 TTCGAGCTGCTTACCGGCAAAAATAAGTCTCTGCTGGTCAGGTGGAATACCCTCCTTGTC 816203 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| || || | | || || || | ||| || || | ||||| || Sbjct 816202 CTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAGGACTCAACTTCAAGTGTAATAGT 816143 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || || || ||||| ||||| Sbjct 816142 CTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 816110 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || || ||| || ||||| ||||| || || || ||| | | || Sbjct 816550 CAAAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATC 816491 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || | ||||||||||||||| || |||| ||| || || | || | ||||||||||| Sbjct 816490 TTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTC 816431 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| || || | | || || || | ||| ||||| | ||||| || Sbjct 816430 CTGGATCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAACCTCGAGTGTAATAGT 816371 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || || ||||| |||||||| Sbjct 816370 CTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 816338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937483933075