Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq9 302 5e-77 seq6 123 3e-23 seq1 118 1e-21 >seq9 Length=581722 Score = 302 bits (334), Expect = 5e-77 Identities = 919/1406 (65%), Gaps = 43/1406 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| | || ||||| | ||||| ||||| ||||| || ||| ||| | || || Sbjct 352942 CCACAGCATTTGATCATGAGAGTCGCTATCGGTATCCATGGTAGAGATATTAAATCAGTT 353001 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| || || ||||| | || || |||| ||||| | ||||| | || Sbjct 353002 ATTGAGACTTATAACCTCATGTCTGAGAGATAC-TTCACCCACGCTTCTCCAACTTTGTT 353060 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| |||||||| ||| || ||||||||| ||| |||||| | || | | || || Sbjct 353061 CAACGCTGGTACCCCACACCCACAGATGTCCTCTTGTTTCCTTGTGGCTATGAGAGAAGA 353120 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || ||| | |||||||||| ||| | | | ||||| ||||| ||| ||||| Sbjct 353121 TTCCATCGAGGGTATCTATGAGACTTTGAAACAATGTGCCTTGATCTCCAAGACCGCTGG 353180 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||| || | ||||||||| | || ||||| | ||| ||| || || || Sbjct 353181 TGGTATCGGTTTACACATCCATAACGTTAGAGCTACAGGTTCTTACATTGCTGGTACTAA 353240 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| || | ||| | ||||||||| |||| || |||||| ||| || || || || Sbjct 353241 CGGTACTTCTAACGGTTTGATTCCAATGGTTCGTGTCTTTAACAACACTGCTCGTTACGT 353300 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATGGCA 75624 | |||| || | |||| | || ||| || | || |||||||||||||| Sbjct 353301 CGACCAAGGTGG---TAACAAGAGACCTGGTGCATTTGCCCTTTATTTGGAACCATGGCA 353357 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || |||||| | || ||| | || | || || || ||| | |||||| || | | Sbjct 353358 CGCAGATATCTTTGATTTCATCGACATTAGAAAGAATCACGGTAAAGAAGAGA-TCAGAG 353416 Query 75685 -TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | ||| | || || | ||||||| || || | |||||| | || |||||| Sbjct 353417 CTCGTGATTTGTTCCCAGCATTGTGGATCCCTGATTTGTTCATGGAACGTGTTGAGTCTA 353476 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 |||| ||||| || | |||| |||| | | ||||||||||| | || |||| Sbjct 353477 ATGGTGAATGGACTTTGTTCTCTCCAAATGAAGCACCAGGTCTTGCTGATTGTTATGGTG 353536 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | || || | || || || |||||||| | || ||| | | | |||||| | Sbjct 353537 ATGAATTCAAGGCTCTTTATGAGAAGTATGAGAAAGAAGGTCGTGGTAGAAAGACTGT-C 353595 Query 75864 CAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 || | | | ||| ||| | || || || | | ||||| |||||||| || |||| Sbjct 353596 AAGGCTCAAAAGTTGTGGTATGCAATCCTTGATGCCCAGACTGAGACTGGTACTCCATTC 353655 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||||||||||||||||| |||||| |||||| |||||| ||||| ||||| | |||||| Sbjct 353656 ATGCTTTACAAGGATGCCTGTAACGAGAAGACTAACCAGAAGAACTTGGGTATGATCAAG 353715 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 || || | || || ||| | || ||| | || || || |||||||| Sbjct 353716 TCTTCTAACTTGTGTTGTGAGATTGTCGAATACTCTGACCCAGAAGAAGTTGCTGTTTGT 353775 Query 76043 AATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA---------------GACT 76087 || ||||| || || || | ||| | ||| |||| | ||| Sbjct 353776 AACTTGGCCTCCATTGCATTGCCA---GCTTTCATTGAAAAATCCCTTGATGGTACCACT 353832 Query 76088 CGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAAC 76147 | |||| | | | |||| | ||| |||| | ||| |||| || || || | ||| Sbjct 353833 CAGACTTATAACTTTGAACGTTTGCATCAAATTGCCAAGGTTGTCACAAAGAACTTGAAC 353892 Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACA 76206 || |||||||| | || | || || || ||| || |||| || |||||| || | Sbjct 353893 AGAATCATTGACCGTAACTACTACCCAGTCCCAGA-AGCTAGAAACTCCAATATGAGAAA 353951 Query 76207 CAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGC 76266 |||||| |||| | |||||||||||| | || |||| ||||| | | || | | Sbjct 353952 CAGACCAATTGCCCTCGGTGTTCAAGGTTTAGCTGATGCCTTTATGATTTTGCGTTTGCC 354011 Query 76267 ATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGC 76326 |||||| || || | || ||||| |||| || ||||| || ||||| |||||||| Sbjct 354012 ATTTGAATCTGAAAAGGCTAAGGAATTGAACATTCAGATCTTCGAGACCATTTATCACGC 354071 Query 76327 ATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGG 76386 | ||||| | | ||| | || | || ||||| | || || |||| | || Sbjct 354072 TGCTTTGGAGTCCTCTCTTGAGCTCGCCAAGTCCGAAGGTCCATACGAATCATTCCAAGG 354131 Query 76387 TTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCA- 76445 ||| || || || | || |||||||||||| | |||| | |||| | | | Sbjct 354132 TTCCCCAGCTTCTAAGGGTCAGCTTCAGTTTGACCTTTGGG--GAAGAAAGCCTTCCGAT 354189 Query 76446 -ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504 | || |||||| ||| |||| || || | ||| | | ||| |||| Sbjct 354190 TTGTGGGATTGGGATACTCTTAAGGCTGATATTGTCAAGTACGGTTTGAGAAAC--TCTT 354247 Query 76505 T--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 76562 | | | || ||||||||||| ||||| || | |||||||||||| | || ||||| | Sbjct 354248 TGCTTGTTGCTCCAATGCCAACTGCCTCGACTTCTCAAATCTTGGGTTACAACGAATGTT 354307 Query 76563 TTGAACCATACACAACAAACATCTAC 76588 | ||||||||||| | ||||| ||| Sbjct 354308 TCGAACCATACACTTCTAACATTTAC 354333 >seq6 Length=680632 Score = 123 bits (136), Expect = 3e-23 Identities = 203/289 (70%), Gaps = 8/289 (3%) Strand=Plus/Plus Query 64945 TTGATTGACAAATACATTAAGGATGGATCTGAAAAGA---AGCAGTTATTTGAAGCCATC 65001 |||||||||| || || |||||| | || || || | || ||| | ||||| Sbjct 382107 TTGATTGACACTTATATCAAGGATCCAC---AACAGGCTGAGTATTTGTTTAATGCCATT 382163 Query 65002 CAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAA 65060 | ||| | ||||||||| |||||||||| | ||||| ||| |||| ||| | | || Sbjct 382164 GAGACTATTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGAA 382223 Query 65061 GTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTC 65120 | | || |||| ||| | ||| |||| ||||| ||| || |||||||||||||| Sbjct 382224 GAAGC-CTTGTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTC 382282 Query 65121 CGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTT 65180 || || || | |||||| |||||||||||| | ||| | |||||||| | || Sbjct 382283 TGGTTCCTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTT 382342 Query 65181 CTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 ||| ||||| | |||| ||| ||||| ||| | ||| || |||||| Sbjct 382343 CTCTAATGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTTTGCC 382391 >seq1 Length=2087116 Score = 118 bits (130), Expect = 1e-21 Identities = 105/129 (81%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 27904 AAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCA 27963 ||||| ||||| | ||| ||||||||||| || || ||||||||| | ||||| | |||| Sbjct 445989 AAGTCCTTGTCACTGTGGTTGAAGAGAACAACCTTCACTTCACCTCTGTAGTCTGCATCA 445930 Query 27964 ATAACACCCGCACCAACTTGA-ATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAAC 28022 | ||||| ||||| |||| ||||| |||||||| || | |||||| ||||| ||||| Sbjct 445929 ACGACACCGGCACCTG-TTGAGATACCGTGCTTCACGGCCAAACCGGAACGTGGAGCAAC 445871 Query 28023 ACGACCATA 28031 ||||||||| Sbjct 445870 ACGACCATA 445862 Score = 98.7 bits (108), Expect = 1e-15 Identities = 254/384 (66%), Gaps = 10/384 (3%) Strand=Plus/Minus Query 13510 GGAACTCAAGAAGACCGATGGTGCTCGCAAGTCCAAAATTACCGGTATTCCCAAGTTGGA 13569 || |||||||||||| |||||| | | ||||||| ||||||| | || ||| | | Sbjct 116468 GGCACTCAAGAAGACAGATGGTTCCAGAAAGTCCAGAATTACCAACTTGCCAAAGCTTCA 116409 Query 13570 TGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAGTGTACTCTCATTGTCACAGAGGG 13629 ||| || |||| ||| ||||| | || | || |||||| | || | |||||||| Sbjct 116408 TGATGCCAACATGGCAGGTACTAAAGAAGGTTATAAATGTACTTTGATCTTGACAGAGGG 116349 Query 13630 TGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGATCACTACGG 13689 |||||| || | | || ||||| ||||| | || || || | || |||| || Sbjct 116348 TGATTCCGCCTTGGCATTGGCCGTTGCAGGTCTAGCAGTTGTCGGAAGAGACTACTATGG 116289 Query 13690 TGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGGACGCTTCGGTGGCACAGCTCAC 13749 | ||||| | || |||||| ||||||| | || ||||| | || || | Sbjct 116288 TTGTTTCCCGTTGCGTGGTAAACCATTGAATGTTAGAGAGGCTTCTCATACCCAAATCTC 116229 Query 13750 ATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCTTGGTCTTCA--ACAAGGAAAAG-A 13806 || |||| |||| | | ||| ||||| ||||| | || ||||| | ||| | Sbjct 116228 CAATAATGCGGAGATCAATGCCTTGAAGCAGATCATTGGTTTGCAACACAAGAAGAAGTA 116169 Query 13807 CTA--CCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTATGATTATGACAGATGCCGAT 13864 | | || | || | ||| | ||||| ||| | ||| | ||||||||| ||| Sbjct 116168 CGAGGACACCAAGTCTTTGA-----GATATGGCCGTATCATGCTCATGACAGATCAGGAT 116114 Query 13865 AATGATGGTTCTCACATCAAGGGT 13888 | |||||||| || ||||||||| Sbjct 116113 ACCGATGGTTCCCATATCAAGGGT 116090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569413572000