Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq6 167 3e-36 seq5 127 3e-24 seq16 89.7 8e-13 >seq6 Length=680632 Score = 167 bits (184), Expect = 3e-36 Identities = 371/555 (67%), Gaps = 11/555 (2%) Strand=Plus/Minus Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211 || ||||| ||||| |||||||| ||||||||||| | | | || || || ||| || Sbjct 382399 AACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAA 382340 Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271 || || || ||||| | |||||| || || | ||| || || || || || || ||| Sbjct 382339 GTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAG 382280 Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTG 18331 ||||| ||||| ||||| || || || | | ||| ||| | || | || || Sbjct 382279 AAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTC-TTC 382221 Query 18332 CTCAGTA-TCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390 || | | ||||| | ||||| || | | ||||| || ||| |||| || Sbjct 382220 ATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAAT 382161 Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450 ||||||||||||| || | || | ||| || ||||||||||| || || | ||| Sbjct 382160 GGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCAATCAAGAGAGA 382101 Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510 || | ||||| || ||| | ||||| || || |||| || || | |||| || Sbjct 382100 GTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTC 382041 Query 18511 GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570 ||| ||| | |||| | | || | || ||||| ||||||||||| |||||||||| Sbjct 382040 TGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTCAGA 381981 Query 18571 AGATGCGAAAAATGCCAAAAC---ATATTTAATGAAATGTTTTTCATTATCCTTGA---G 18624 || || || || || | ||| | | | | |||| | |||||| || || | Sbjct 381980 AGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACG---TTCATTCTCATTCAATCT 381924 Query 18625 ATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGA 18684 |||||||| |||| | ||| || || | ||||| || || | ||||| ||||| | Sbjct 381923 GTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAAGAAGC 381864 Query 18685 TTCGGCCTGTTTGTA 18699 ||| |||| ||||| Sbjct 381863 TTCAGCCTTCTTGTA 381849 >seq5 Length=1064489 Score = 127 bits (140), Expect = 3e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||||||| || ||||||||| | || || ||| ||| Sbjct 816566 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 816625 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| ||||| || ||| || ||||| || ||||| || || || || || Sbjct 816626 GACACTATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 816685 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| | || | ||| ||||||||||| || ||| |||||||| || || || || Sbjct 816686 CAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACTTTGTCCGACTACAAC 816745 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| | || ||||| || ||||| ||||| ||||| ||| Sbjct 816746 ATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 816793 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || |||||||| || ||||||||| | ||||| || || Sbjct 816110 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTTGAAGTTGAGTCCTCC 816169 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| ||||| || || || || || || || || || || || || || Sbjct 816170 GACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAG 816229 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| | |||| |||||||||||||||||||||| |||||| | || || || || Sbjct 816230 CAGAGACTTATTTTTGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAAC 816289 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| | || ||||| || || || ||||| ||||| ||| Sbjct 816290 ATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGT 816337 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||||||| || ||||||||| | || || || || Sbjct 816338 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 816397 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||| || ||| || || || || || || || || || || || Sbjct 816398 GATACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 816457 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| | || | ||||||||||||||| |||||| ||||| | || || || || Sbjct 816458 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAAC 816517 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| |||| ||||| || || || ||||| ||||| ||| Sbjct 816518 ATTCAGAAGGAGTCGACCCTTCACTTGGTTTTGAGATTGAGAGGTGGT 816565 >seq16 Length=161790 Score = 89.7 bits (98), Expect = 8e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||| || ||| |||| || | || || || || || || || || || || | Sbjct 4343 AAGATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCT 4402 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | |||| || || || || || || || |||||||| || || || || Sbjct 4403 TCCGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGAC 4462 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || || ||| | || | ||||||||||||||| || ||| ||||| | || || || Sbjct 4463 CAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTAC 4522 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 || || || ||| | || ||||| || ||| | ||||| ||||| |||| Sbjct 4523 AACATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGGTG 4574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871771290000