Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6 161 3e-34 seq9 140 1e-27 seq2 129 2e-24 seq1 102 2e-16 >seq6 Length=680632 Score = 161 bits (178), Expect = 3e-34 Identities = 526/804 (65%), Gaps = 21/804 (3%) Strand=Plus/Minus Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACA 155639 |||| ||| ||| |||| ||||| || |||||||| || || | || |||| || Sbjct 464960 AAGAGCAACAGAGGCCAAGTTACAAACGGCAGTCTC-TTCAGGT-GATGAGTATTGAACC 464903 Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 | ||||| |||| ||| || |||||| || || ||||||||||| ||| || || Sbjct 464902 ACTTCACAACACAAGTTCGAGGACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTA 464843 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 |||||||||||||| || || ||| | || || || || | || | |||| || Sbjct 464842 TTACAAGCATCCTTATAGAGCATGAAAGGACCACCAGTTTCAACTTGAGATTCCAAGATT 464783 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 |||| | | | || ||||| | ||| || |||||| ||||||||| Sbjct 464782 GAGTGCCATAACTTCTGAGCCTTAATCTTCTTCTTTGCCAATCCTTCCTTCTCATATTTG 464723 Query 155820 ATATACAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGG-GCACTTATCG 155876 |||||| || || || ||||| || ||| ||| ||||| ||| | ||| Sbjct 464722 TGATACAG--TTGAACAAATTCTTCACCATACACCTCATTCAAACCAGGAGCA-TCATCT 464666 Query 155877 GGGCAAAACAGCGACCAAATTTTAT--TACCGATTACACGCTCCATAAATACATCACTCG 155934 || | ||||| |||| || || | | | || ||||| |||| ||| Sbjct 464665 GGACTAAACAAGCACCATTCTTCATCTTTCTCA--ACTTTTTCCATGAATAGATCTGGGA 464608 Query 155935 CCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTA 155994 ||| | |||||| || | || | || | ||| || | || |||||||||| || Sbjct 464607 TCCATAGAGCATAAAACAAATCACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTA 464548 Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCAT 156054 | |||||| ||| | ||||| ||| ||| |||| ||| || ||||| ||| Sbjct 464547 AGTTTAAGAAATCCATCACATCAGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTG 464488 Query 156055 TCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111 ||||| ||||| ||||| ||||| | || || ||||| || || | ||||||| Sbjct 464487 GTCTCTTATTACCACCTTGATCAACATATCTTGCGGTGTTATTAAACACTCTAAGCATAG 464428 Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171 | | ||||| || ||||| ||||| | |||| ||| | | ||||| | | || Sbjct 464427 GTACGATACCGTTTGAAGTACCATTTGATCCGGCAATGTATGCACCAGTGGCTCTAATGC 464368 Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACA- 156230 || |||||||| || |||||||| | || || ||| ||| | || | | || Sbjct 464367 TAGATATATGTAGACCGATACCACCAGCAGCCTTCGAGATTAAAGC--AGTCTTGTGCAA 464310 Query 156231 -GTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAA 156289 || || | || || || || || |||||||| ||| ||||| | || || | Sbjct 464309 AGTCTTATATATGCCATCGATGGAGTCATCTTCTATTCCAAGTAGGAAACAGGATGAGAG 464250 Query 156290 TTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATT 156349 | || |||||| |||| |||||||||||| |||| |||||| || | |||||| | Sbjct 464249 ATATGGAGTTGGTGTACCAGAGTTGAATAGTGTTGGTGATGCATGGATGAGATACTTTTG 464190 Query 156350 AGACATATAATCGTATGTCTCCTT 156373 ||||| ||| || |||||||| Sbjct 464189 TGACATGAGATCATAAGTCTCCTT 464166 >seq9 Length=581722 Score = 140 bits (154), Expect = 1e-27 Identities = 554/862 (64%), Gaps = 15/862 (2%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCG-TCGCTGTATTCTACAATCTCA 155645 |||| || |||| ||||| || ||| || ||| | | || |||||| ||||||||| Sbjct 353791 CAATGGAGGCCAAGTTACAAACAGCAA-CTTCTTCTGGGTCAGAGTATTCGACAATCTCA 353733 Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705 || |||| ||||||| |||||| | || || ||||||||||||| || |||||| Sbjct 353732 CAACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAG 353673 Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGC 155765 ||||||||||| || ||| |||| || || ||||| |||| || || || || | Sbjct 353672 GCATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATAC 353613 Query 155766 CAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATA--TTTCATAT 155823 || | | | || || | ||| | | ||||| |||||| | ||||| Sbjct 353612 CACAACTTTTGAGCCTTGACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAA 353553 Query 155824 ACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAA 155883 | ||| || | | || ||||| ||||||||| || || || | || || | | Sbjct 353552 AGAGCCTT--GAATTCATCACCATAACAATCAGCAAGACCTGGTGCTTCATTTGGAGAGA 353495 Query 155884 ACAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATACATCACTCGCCCAAAT 155941 ||| | ||| |||| || | ||||| ||||| || | |||| ||| | Sbjct 353494 ACAAAGTCCATTCACCATTA--GACTCAACACGTTCCATGAACAAATCAGGGATCCACAA 353437 Query 155942 AGCATAGAAAAGGTCCCTTGCCTTTGA-CTCCTCATCGCCGTGATTCTTCCGTAGCTCTA 156000 || ||| | || | | || ||| ||| || | ||||||||||| | | || | Sbjct 353436 TGCTGGGAACAAATCACGAG-CTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGA 353378 Query 156001 AGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCT 156060 ||| || ||||| | || ||| |||| ||| | ||||| |||| |||| Sbjct 353377 TGAAATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCT 353318 Query 156061 TG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAA 156117 || ||||| || || || || |||||||| || || ||||||| | ||| ||||| | Sbjct 353317 TGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCA 353258 Query 156118 TACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAA 156177 ||| || ||||| || || || || ||| | ||||| | | | ||| ||||| | Sbjct 353257 AACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCTGTAGCTCTAACGTTATGGA 353198 Query 156178 TATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGA 156237 | |||| || |||||||| | || || || || |||| || | ||| | Sbjct 353197 TGTGTAAACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCAT 353138 Query 156238 AAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTC 156297 | ||||| || || ||||| ||| ||| | | || | || || | || || Sbjct 353137 AGATACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGT 353078 Query 156298 GTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATAT 156357 |||| || ||||||||||| | || || | || || | || || | | |||||| Sbjct 353077 GTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGA 353018 Query 156358 AATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCA 156417 | || ||||| ||| | || || || || |||| ||||| ||| |||| Sbjct 353017 GGTTATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCA 352958 Query 156418 TCCACATATGCTGAGGACGCTC 156439 | || |||||| ||||| || Sbjct 352957 TGATCAAATGCTGTGGACGTTC 352936 >seq2 Length=1705267 Score = 129 bits (142), Expect = 2e-24 Identities = 266/390 (68%), Gaps = 8/390 (2%) Strand=Plus/Minus Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550 |||| || || || |||||| |||||||||| || | | ||||| ||| Sbjct 1332084 TCAAGACCATCCTCACCGTAGATGAACTGAATGATGTTACCCAAGGAGTTTCTGGTGGTA 1332025 Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610 ||| ||| || ||| || ||||||| ||||| | |||||| |||||||||||| Sbjct 1332024 CCATCGTAATGAACCATGATATCTTCCAATGCCTTGACAAGACGACGTTGAATATAACCA 1331965 Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 || | || || || || |||||||| | ||| |||||||||||||||| |||||| Sbjct 1331964 GTCTCGGCAGTCTTGACGGCGGTATCAATCAAACCCTCACGACCACCCATAGCGTGGAAG 1331905 Query 302671 AATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCT 302728 | | ||||| ||| || | || | ||| ||||| |||| |||||||| | || Sbjct 1331904 TAGAACTCTTGTGGT-GTCAAACCTCTCAA-GTAGGAGTTCTCGACGAAACCCTTAGACT 1331847 Query 302729 CGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGA 302788 | || || | || ||||| || ||||||| || | | | |||| ||| | Sbjct 1331846 CAGGAGAGTAATCATCCTTGGAGAAATGTGGCAAAGTACGATCAGCGAAGCCAAATGCAA 1331787 Query 302789 TACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAAT 302848 ||||||| || |||||| |||||| || | || | | |||||| | ||| || ||| Sbjct 1331786 TACGCTTACCCTCAACGGACTGCTGACCAACACAGGCAGACATCTGGGCAATGTT--AAT 1331729 Query 302849 CACTG--CCCTTGGAGCCAGCATTTACCAT 302876 | | |||||||| |||||| | ||||| Sbjct 1331728 GAAAGAACCCTTGGAACCAGCACTGACCAT 1331699 Score = 109 bits (120), Expect = 2e-18 Identities = 109/141 (77%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 || |||||||| | ||| ||||||||| || || || |||||| ||||||||||| Sbjct 1332778 CAAAATTTCTTTCAAACGTGGAACACCAGAAGTAACCTT---CTTGGAAGCAACACCAGC 1332722 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 || ||||||||||||| || | || |||| ||||||||||||| || || |||| Sbjct 1332721 GAAATGGAAAGTATTCAACGTCATCTGTGTAGCTGGCTCACCAATAGACTGGGCAGCAAC 1332662 Query 301932 CATACCAACCATTTCTCCTGG 301952 || ||||||||| || ||||| Sbjct 1332661 CACACCAACCATCTCACCTGG 1332641 Score = 98.7 bits (108), Expect = 3e-15 Identities = 194/285 (68%), Gaps = 4/285 (1%) Strand=Plus/Plus Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483 ||| | ||| || ||| | ||||||||||| || | | |||| |||| || Sbjct 841268 ACAAATATGCACTCTGAAGGCATCAGATGCCTCCATCAATCTCTCCTTCATGAACGAAGC 841327 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 |||||||| | ||||||||||||||||||||||||||||||||| | ||||||||| | Sbjct 841328 AGCACCGTGAGCAATCATACAATCACGCTCCATTTCACCGAAACGCAAACCACCATCTCT 841387 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 | | |||||| | ||||| | || || | || ||||| | | | | ||| Sbjct 841388 TGAACGACCCTCCACTGGCTGTCTCGTAAGGATTTGCACCGGACCTCTAGCTCTGGCATG 841447 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA--TG 251661 ||| |||| |||||||| | | ||| |||||| | | ||||| | ||| | || Sbjct 841448 AATCTTGTCATCAACCATATGTCTCAAACGTTGGTAGTAAGTAGGACCAAAGAACACTTG 841507 Query 251662 CTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCG 251706 | | ||| | || ||||| || |||| ||||| || ||| Sbjct 841508 GGCCA--TCATCTTCTTACCAGTGTGACCGTTGTACATCACCTCG 841550 Score = 95.1 bits (104), Expect = 4e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331 ||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||| | Sbjct 841328 AGCACCGTGAGCAATCATACAATCACGCTCCATTTCACCGAAACGCAAACCACCATCTCT 841387 Query 233332 TGACCTACCCTGGACTG 233348 ||| | ||||| |||| Sbjct 841388 TGAACGACCCTCCACTG 841404 >seq1 Length=2087116 Score = 102 bits (112), Expect = 2e-16 Identities = 223/332 (67%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 289020 CCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCT 289079 ||| | |||||||| ||||||||||| |||| || || | | |||| || ||| Sbjct 1374638 CCTCTCTTTACCAATGGCATCAATTTCATCAACAAAGATGATAGCTGGAGCCATTGTTCT 1374579 Query 289080 CGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAA 289139 ||| || || || || | || | ||| || |||| ||| ||| |||| || ||||| Sbjct 1374578 AGCAGTTTTGAACAAATCACGAACTCTGGAGGCACCAACACCGACAAACATCTCGACAAA 1374519 Query 289140 TTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAG 289199 || ||| | || ||| || ||| | ||| || || || || ||| | || || Sbjct 1374518 CTCTGAACCAGACACTGAAAGGAAAGGAACACCAGCCTCACCGGCGGTAGCCTTAGCAAG 1374459 Query 289200 AAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCC 289259 ||| ||||||||||| || || || || || | | || || | ||||| || Sbjct 1374458 AAGGGTCTTACCTGTACCTGGGGGACCAGACAAGATGGCACCACGAGGAATCTTTGCACC 1374399 Query 289260 AGCAGACTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATAT 289317 | || || |||||||| ||| |||| ||||| || |||| |||| | ||| | Sbjct 1374398 A--AGTTTTTCATATTTCTGTGGGTTCTTCAAAAACTCAACAAATTCCATGATTTCCTCC 1374341 Query 289318 TTTGCCTCATCACATCCTGCTACATCAGCAAA 289349 || || |||||||| || || ||||| ||||| Sbjct 1374340 TTAGCTTCATCACAACCGGCAACATCGGCAAA 1374309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817128558425