Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq5 143 2e-29 seq16 129 5e-25 seq9 98.7 9e-16 >seq5 Length=1064489 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || ||||| |||||||| ||||| || ||| || | Sbjct 816566 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 816625 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||||| |||||||| ||||| || || || || || Sbjct 816626 GACACTATTGACAACGTTAAGTC-TAAGATTCAAGACAAGGAAGGTATTCCACCTGACCA 816684 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | |||||||| || || ||||| |||||| |||| |||| || || || Sbjct 816685 GCAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACTTTGTCCGACTACAA 816744 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| ||||| || || || |||||||||||| ||||| | || || Sbjct 816745 CATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 816792 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || ||||| |||||||| ||||| || || || || Sbjct 816338 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 816397 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| | |||||||| ||||| || || || || || || || Sbjct 816398 GATACTATTGACAACGTTAAGTC-TAAGATCCAGGACAAGGAGGGTATCCCACCTGACCA 816456 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | ||||||||||| || ||||| || ||| |||| | | || || || || Sbjct 816457 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAA 816516 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| ||||| ||||| || |||||||| ||| ||||| | || || Sbjct 816517 CATTCAGAAGGAGTCGACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 816564 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| || || || || || ||||| || | | ||||||||||| || Sbjct 815966 AAGATTCAGGACAAGGAGGGTATCCCGCCTGATCAGCAGAGACTTATCTTTGCCGGTAAG 816025 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| |||||| |||| | | || || || ||||| || ||||| || || || ||| Sbjct 816026 CAGCTTGAGGATGGTAGAACCCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTCAC 816085 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||| ||||| | || || Sbjct 816086 TTGGTTTTGAGATTGAGAGGTGG 816108 >seq16 Length=161790 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| |||| || || || ||||| || || || | || || || | | Sbjct 4345 GATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTC 4404 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||||||||| || || || || || Sbjct 4405 CGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCA 4464 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | ||||||||||| || ||||| |||||| |||| | | || || || || Sbjct 4465 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAA 4524 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 |||||| ||||| || || || ||||||||| | ||||| | || || || Sbjct 4525 CATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGGTGG 4575 >seq9 Length=581722 Score = 98.7 bits (108), Expect = 9e-16 Identities = 364/565 (64%), Gaps = 23/565 (4%) Strand=Plus/Minus Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139 ||| ||||| | ||| || || || ||||| || ||||| |||||||||||| || Sbjct 353790 AATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACA 353731 Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199 |||||| ||| | |||||||| |||| || || | || || | || |||||| || Sbjct 353730 ACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGC 353671 Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAA 139259 ||| ||||||||||| | || || ||||| || || | || | || | | Sbjct 353670 ATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCA 353611 Query 139260 CAA-----GTCCCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCG 139314 ||| | ||| | || ||| |||| | ||| | ||| ||||| || Sbjct 353610 CAACTTTTGAGCCTTGACAGTCTTTCTACCACG--ACCTTCTT---TCTCATACTTCTCA 353556 Query 139315 TAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATC----GCGACACTTGTCAGG 139370 || || | | |||| ||||| || |||| |||| | || || || || Sbjct 353555 TAAAGAGCCTTGAATTCATCACCATAACAATCAGCAAGACCTGGTGCTTCATTT----GG 353500 Query 139371 ACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCA 139430 | | | | | |||| | || || | || || || |||||||| ||| || ||||| Sbjct 353499 AGAGAACAAAGTCCATTCACCATTAGACTCAACACGTTCCATGAACAAATCAGGGATCCA 353440 Query 139431 CAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTT-TCATGT 139489 ||| || | |||||| || || | | ||||| | || || | | || | |||| Sbjct 353439 CAATGCTGGGAACAAATCACGAGCTCTGATCTCTTCTTTA-CCGTGATTCTTTCTAATGT 353381 Query 139490 TAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TT 139546 | ||||||||| | || |||||||||||||||| ||| | ||| | ||| || | Sbjct 353380 CGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTC 353321 Query 139547 TCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCT 139606 || || |||||||| ||||||| || ||| || || || || || | ||| || Sbjct 353320 TCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAA 353261 Query 139607 CCAGACCGCTCGCTGTTCCGTTGGT 139631 || |||| | | || ||||| || Sbjct 353260 TCAAACCGTTAGAAGTACCGTTAGT 353236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897459407000