Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq6 188 2e-42 seq9 147 5e-30 >seq6 Length=680632 Score = 188 bits (208), Expect = 2e-42 Identities = 349/503 (69%), Gaps = 17/503 (3%) Strand=Plus/Plus Query 110667 AAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATAT 110726 || ||| |||||| || | || || ||| | ||||| || || |||| |||| |||| Sbjct 464403 AATGGTACTTCAAACGGTATCGTACCTATGCTTAGAGTGTTTAATAACACCGCAAGATAT 464462 Query 110727 GTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCAT 110783 || ||||||||||||| |||| || ||||||| |||||| | ||||| |||||| Sbjct 464463 GTTGATCAAGGTGGTAATAAGAGACCAGGTGCATTTGCCATCTATTTGGAACCATGGCAT 464522 Query 110784 TCAGATATATTTGAATTCTTAGAACTTC-GTAAAAATCAAGGATTTGAAGAACAAAGAGC 110842 | ||| | | || |||||| ||||| | || ||||| ||| ||||| ||||| Sbjct 464523 GCTGATGTGATGGATTTCTTA-AACTTAAGGAAGAATCATGGAAAGGAAGAGATGAGAGC 464581 Query 110843 ACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAA 110902 |||||||| |||||||| | ||||| ||||| |||||||| || ||| | || | Sbjct 464582 TCGTGATTTGTTTTATGCTCTATGGATCCCAGATCTATTCATGGAAAAAGTTGAGAAAGA 464641 Query 110903 TGGCATGTGGTCTCTTATGT-GTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAA 110961 || |||| ||| | | |||| || | |||||||| | ||| || ||||| Sbjct 464642 TGAAGAATGGTG-CTTGTTTAGTCCAGATGATGCTCCTGGTTTGAATGAGGTGTATGGTG 464700 Query 110962 AAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAA---- 111017 |||| |||| | || || | |||||||| || ||||| || ||||| || Sbjct 464701 AAGAATTTGTTCAACTGTATCACAAATATGAGAAGGAAGGA----TTGGCAAAGAAGAAG 464756 Query 111018 ATTCCAGCTCAAGAACTT-TGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCC 111076 ||| ||||| ||| || ||| | |||| | ||||| |||||||||||||| ||| Sbjct 464757 ATTAAGGCTCA-GAAGTTATGGCACTCAATCTTGGAATCTCAAGTTGAAACTGGTGGTCC 464815 Query 111077 TTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAAT 111136 || || | ||||| ||| | |||| | || |||||| | |||||| || ||||| Sbjct 464816 TTTCATGCTCTATAAGGATGCTTGTAATAGAAAGAGTAATCAGAAGAATTTGGGTACAAT 464875 Query 111137 TAAGTCTAGTAATTTGTGCTGTG 111159 ||||| || ||||| |||| Sbjct 464876 CAAGTCCTCGAACTTGTGTTGTG 464898 Score = 87.8 bits (96), Expect = 4e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 131795 ATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTC- 131853 ||||| ||||| || || |||||| | | ||||||| ||||| || || ||| Sbjct 382179 ATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGAAGAAGCC--TTGTTCG 382236 Query 131854 -TACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTG 131912 | |||||||| || ||||| |||||||||||| ||||| || ||| | || Sbjct 382237 GTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTTCCTTTGCCT 382296 Query 131913 CTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCA 131972 |||| || ||| | |||||| | || |||||||| || | | || || ||| | || | Sbjct 382297 CTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTAATGAGTTGA 382356 Query 131973 TCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 | | | ||||||| ||||| ||||| ||||| Sbjct 382357 TTTGCCGTGATGAAGGTTTGCACACTGACTTTGC 382390 >seq9 Length=581722 Score = 147 bits (162), Expect = 5e-30 Identities = 457/704 (65%), Gaps = 5/704 (1%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| ||||||||||| || | || | |||| || | ||||| ||||| | || Sbjct 352874 ACTACTTTGGTTTCAAGACATTGGAGAGATCTTACTTGTTGCGTGTTAATGGTAAAGTCG 352933 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 ||||||||| || || || | | | || || || ||||| ||||| ||||||| Sbjct 352934 CTGAACGTCCACAGCATTTGATCATGAGAGTCGCTATCGGTATCCATGGTAGAGATATTA 352993 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCT 110480 || | |||||||| |||| | | | | | | || | | | || ||| |||| Sbjct 352994 AATCAGTTATTGAGACTTATAACCTCATGTCTGAGA-GATACTTCACCCACGCTTCTCCA 353052 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540 || | || ||||| || || ||| || | ||||| || ||| | | || Sbjct 353053 ACTTTGTTCAACGCTGGTACCCCACACCCACAGATGTCCTCTTGTTTCCTTGTGGCTATG 353112 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600 | || ||||| || || ||||| ||||| || | ||| || ||| | || || || Sbjct 353113 AGAGAAGATTCCATCGAGGGTATCTATGAGACTTTGAAACAATGTGCCTTGATCTCCAAG 353172 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660 | | |||| || || ||| | ||| | ||| | || | | | ||| | | || || Sbjct 353173 ACCGCTGGTGGTATCGGTTTACACATCCATAACGTTAGAGCTACAGGTTCTTACATTGCT 353232 Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720 | || ||| |||| | || | |||||||| | | ||||| ||| ||||||| Sbjct 353233 GGTACTAACGGTACTTCTAACGGTTTGATTCCAATGGTTCGTGTCTTTAACAACACTGCT 353292 Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777 || || | ||||||||| |||||| ||| ||||||| | ||| | ||||| Sbjct 353293 CGTTACGTCGACCAAGGTGGTAACAAGAGACCTGGTGCATTTGCCCTTTATTTGGAACCA 353352 Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837 ||||| ||||||| ||||| ||| | || || | || ||||| || ||||| Sbjct 353353 TGGCACGCAGATATCTTTGATTTCATCGACATTAGAAAGAATCACGGTAAAGAAGAGATC 353412 Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897 ||||| |||||||| || ||| ||||||| | ||||| |||||| |||||||| | Sbjct 353413 AGAGCTCGTGATTTGTTCCCAGCATTGTGGATCCCTGATTTGTTCATGGAACGTGTTGAG 353472 Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATAT 110957 ||||| ||| || | | | ||| || | || ||||| ||||| ||| Sbjct 353473 TCTAATGGTGAATGGACTTTGTTCTCTCCAAATGAAGCACCAGGTCTTGCTGATTGTTAT 353532 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG 111001 || | || || | | ||||| || || ||||| |||||||| Sbjct 353533 GGTGATGAATTCAAGGCTCTTTATGAGAAGTATGAGAAAGAAGG 353576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812419849025