Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 2e-15 seq16 93.3 3e-14 >seq5 Length=1064489 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | |||||||| || |||||| ||| || || |||||||| ||||| Sbjct 816793 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 816734 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || || | || || || ||||| || | | |||||| || | || Sbjct 816733 CAAAGTTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGG 816674 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || | | ||| | ||| | ||||| ||||| | Sbjct 816673 AATACCTTCCTTGTCTTGAATCTT-AGACTTAACGTTGTCAATAGTGTCAGAGGATTCAA 816615 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || ||||| || || || || ||||||||||||||| Sbjct 816614 CCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATA 816565 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || ||||| || |||||| ||| || || |||||||| ||||| Sbjct 816337 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 816278 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | | || || | || || ||||||||||| | | |||||| || | || Sbjct 816277 GAGGGTTCTGCCATCTTCGAGCTGCTTACCGGCAAAAATAAGTCTCTGCTGGTCAGGTGG 816218 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| ||| || | | || | ||| | |||||| || || | Sbjct 816217 AATACCCTCCTTGTCCTGAATCTT-GGACTTGACGTTGTCAATAGTGTCGGAGGACTCAA 816159 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || ||||| || || || || || || || |||||| Sbjct 816158 CTTCAAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCATA 816109 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || ||||| || || || ||| || || |||||||| ||||| Sbjct 816565 ACCACCTCTCAATCTCAAAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 816506 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | | || || | || || |||||||| || | | |||||| || | || Sbjct 816505 GAGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGG 816446 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| || || | | ||| | ||| | || ||| || || | Sbjct 816445 GATACCCTCCTTGTCCTGGATCTT-AGACTTAACGTTGTCAATAGTATCGGAGGACTCAA 816387 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || ||||| || || || || ||||||||||||||| Sbjct 816386 CCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATA 816337 >seq16 Length=161790 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | | |||||| || || ||| ||| || || |||||||| || | Sbjct 4574 CACCACCTCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAG 4515 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || || | | || || | || || |||||||| || | | |||||| || | | Sbjct 4514 AAAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTG 4455 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||||||||| || || | | |||| ||| | |||||| || || Sbjct 4454 GGATACCTTCTTTGTCCTGGATCTT-GGACTTGACATTGTCAATAGTGTCGGAAGACTCA 4396 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || ||||| || | || || |||||||||||||| Sbjct 4395 ACCTCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCAT 4346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703899848000