Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq5 116 3e-21
seq16 105 6e-18
seq7 91.5 1e-13
>seq5
Length=1064489
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||||||||| || | || |||||| ||||||||||| |||| |
Sbjct 816792 CCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 816733
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || || ||||||||||| ||||| || | | ||||||||| | |||
Sbjct 816732 AAAGTTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGA 816673
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||| ||||| ||| | |||| | | ||||| ||||| ||
Sbjct 816672 ATACCTTCCTTGTCTTGAATCTTAGACTT-AACGTTGTCAATAGTGTCAGAGGATTCAAC 816614
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | || || || ||||| ||||| || || ||||| ||||||||
Sbjct 816613 CTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 816566
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||| ||||| || | || |||||| ||||||||||| ||||
Sbjct 816564 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAG 816505
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| | || || ||||||||||| ||||| || | | ||||||||| | ||
Sbjct 816504 AGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 816445
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||||| |||||| ||| | |||| | | || ||| || || ||
Sbjct 816444 ATACCCTCCTTGTCCTGGATCTTAGACTT-AACGTTGTCAATAGTATCGGAGGACTCAAC 816386
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | || || || ||||| ||||| || || ||||| ||||||||
Sbjct 816385 CTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 816338
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||| ||||| || | || |||||| ||||||||||| ||||
Sbjct 816336 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 816277
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| | || || ||||||||||| ||||| || | | ||||||||| | |||
Sbjct 816276 AGGGTTCTGCCATCTTCGAGCTGCTTACCGGCAAAAATAAGTCTCTGCTGGTCAGGTGGA 816217
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||||| ||||| ||| | |||| | | |||||| || || ||
Sbjct 816216 ATACCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCAATAGTGTCGGAGGACTCAAC 816158
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | || || || ||||| ||||| || ||||| || || |||||
Sbjct 816157 TTCAAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 816110
>seq16
Length=161790
Score = 105 bits (116), Expect = 6e-18
Identities = 169/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 35499 TCTCTTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555
|||||| || ||||||| | || || | |||||| || | || |||||| ||||
Sbjct 4585 TCTCTTC-TTACCACCACCTCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAA 4527
Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615
||||||| || | | ||||| | || || ||||||||||| ||||| || | | ||
Sbjct 4526 TGTTGTAGTCAGAAAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCT 4467
Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675
||||||| | || | | || |||||| |||||| ||| | | | | | ||||
Sbjct 4466 GCTGGTCAGGTGGGATACCTTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGT 4407
Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
|| || || ||||||| ||||| || |||||||| | || || ||||| |||||||
Sbjct 4406 CGGAAGACTCAACCTCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCA 4347
Query 35736 T 35736
|
Sbjct 4346 T 4346
>seq7
Length=598726
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || || | |||||||| || || |||||| || |||||||| || |
Sbjct 431682 CCACCTCTCAATCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 431741
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| |||| || ||||||||||| || || || | | ||||||||| | ||
Sbjct 431742 AGGGTTCTACCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 431801
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||||| |||||| ||| | |||| | | ||||| || || ||
Sbjct 431802 ATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCAGAGGACTCAAC 431860
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
||||| || || || ||||| ||||| || || || ||
Sbjct 431861 CTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 431899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793459127000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |