Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq6 150 1e-31
seq2 123 2e-23
seq13 91.5 1e-13
>seq6
Length=680632
Score = 150 bits (166), Expect = 1e-31
Identities = 397/591 (67%), Gaps = 19/591 (3%)
Strand=Plus/Plus
Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767
||||| | |||| || ||||| || ||||| ||||| || || | || || || ||
Sbjct 381815 TTTCCCAATCAAGTACCATGAGATCTGGCAGGCATACAAGAAGGCTGAAGCTTCTTTCTG 381874
Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGCATTAAAACCAC 43826
||| || || || |||||||| |||| || || ||| |||||| || | | |
Sbjct 381875 GACCGCTGAGGAGATTGATTTGTCTAAGGATTT-GCATGATTGGAA--CAACAGATTGAA 381931
Query 43827 A-AGAAA-AACATTTTAT-ATCTTTGGTTTTG--GCGTTTTTTGCTGCGAGCGACGGGAT 43881
|||| ||| ||| | |||| | || || || || ||||| || ||||| ||
Sbjct 381932 TGAGAATGAACGTTTCTTCATCTCTCGTGTTCTTGCCTTCTTTGCCGCTTCTGACGGTAT 381991
Query 43882 AGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940
|| ||||| || |||||| || | | || || || ||| | |||||||| |
Sbjct 381992 CGTTAATGAGAACTTGGTTGAGAACTTCTCTGCC-GAGGTGCAAATTCCAGAAGCTAAGT 382050
Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000
|||| || || || ||||| || || || ||||| || || | ||| ||| |||
Sbjct 382051 GTTTCTACGGTTTCCAAATCATGATGGAGAACATTCACTCTGAGACATACTCTCTCTTGA 382110
Query 44001 TAGATACGTACATCAAAGATGGGCACGAGAAGCATCGA--TTGTTTAATGCGATAGAAAC 44058
| || || || ||||| ||| ||| | | || | ||||||||||| || || ||
Sbjct 382111 TTGACACTTATATCAAGGATC--CACAACAGGCTGAGTATTTGTTTAATGCCATTGAGAC 382168
Query 44059 AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA---ATTCAAATGA 44115
| || ||||| | || || || ||||| | | |||||| || | | |
Sbjct 382169 TATTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGAAGAAGC 382228
Query 44116 TTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATC 44175
| || || || ||||||| || ||||| | ||| ||||| || ||||| || || ||
Sbjct 382229 CTTGTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTTC 382288
Query 44176 GTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAA 44235
||||| | || || ||||| ||||| ||||||||||||| || ||||| || || ||
Sbjct 382289 CTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTAA 382348
Query 44236 TGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286
|||||| || | ||||||||||| || || || ||||| || |||||
Sbjct 382349 TGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTTTGCCTGTTTGTT 382399
>seq2
Length=1705267
Score = 123 bits (136), Expect = 2e-23
Identities = 359/543 (66%), Gaps = 16/543 (3%)
Strand=Plus/Minus
Query 19257 TAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGT 19316
||| |||||| | | |||||| | | || || | |||||| | || || | | |||
Sbjct 801972 TAAGGAGTTTACCCAGATCTTTAGACGTGCGTTCGCCTCGCGTATCTTCCCTCCTGCTGT 801913
Query 19317 CATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTT 19375
|| ||| |||||| || | || || || | ||||| ||||| || ||||||
Sbjct 801912 TGTTGAACGATTGGGTATCTCC-CACGTGAAGGGTATGTTGCTCTATGGTCCTCCGGGTA 801854
Query 19376 GTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACAAAAC-AACCTCCCAAA 19434
||| || ||| | ||||| ||| | || ||||| | || ||| | || |||||
Sbjct 801853 CTGGTAAGACACTCATTGCTAGAAAGATTGGTAAAATGCT--CAATGCTAAGGAACCAAA 801796
Query 19435 -ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACG 19493
||||| |||||||| ||| |||| || | ||| ||| ||| ||||| || | |
Sbjct 801795 GATTGTTAATGGTCCAGAAGTCTTGTCCAAGTTTGTTGGTTCATCCGAAGAGAACATTAG 801736
Query 19494 ACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTC--TTTG 19551
| |||||| || ||||| |||| | | || | | || | | ||| | |||
Sbjct 801735 AAATTTGTTCAAAGATGCTGA-GAAGGAATACAAGGAAAAAGGTG-AGGAGTCCGGTTTA 801678
Query 19552 CACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC------TGGT 19605
||||| || ||| | ||||| ||||| | | | |||||||||||||| || |
Sbjct 801677 CACATCATTATATTTGATGAGTTGGATTCTGTGTTCAAGCAAAGAGGTTCAAGAGGTGAT 801618
Query 19606 GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAAC 19665
| | ||| || ||| | || |||||||| ||| || | || | || ||||| |
Sbjct 801617 GGTACTGGTGTCGGTGATAACGTCGTCAATCAGCTCTTGGCCAAGATGGATGGTGTCGAT 801558
Query 19666 CAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCC 19725
||| |||| || || || || ||||| |||||||| |||| || || || || | |||
Sbjct 801557 CAATTGAACAACATCTTGGTGATTGGTATGACTAACAGACGTGACTTGATTGATAATGCC 801498
Query 19726 TTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGA 19785
| || || || ||||| || || | | |||| || | || || |||||| ||||
Sbjct 801497 CTCTTGCGTCCTGGTCGTTTCGAGGTTCAAGTCGAGATCCATTTGCCAGATGAACATGGA 801438
Query 19786 CGT 19788
|||
Sbjct 801437 CGT 801435
>seq13
Length=262405
Score = 91.5 bits (100), Expect = 1e-13
Identities = 408/638 (64%), Gaps = 30/638 (5%)
Strand=Plus/Minus
Query 40740 GAACTGTTATGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTG 40799
||||| || |||||||| || || ||| ||| |||||| | ||| |||||||
Sbjct 259837 GAACTATTGTGGTTTATTGCCGGCTGCACTGATGGTAAGAAGCTCAGTGAACAAGGAGTG 259778
Query 40800 CACATTTGGAATGCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGG 40859
| |||||| | | | | || | | ||| | ||| | |||||| ||| |
Sbjct 259777 AAGATTTGGGAAGGTAATGGATCAAGAGAATACCTCGATAGTCTTGGATTAACCGATCGT 259718
Query 40860 GATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATAT 40919
|||||||||| | ||||| |||||||| || || | | |||| ||||| || | ||
Sbjct 259717 CGTGAAGGTGATTTAGGTCCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAGTAC 259658
Query 40920 GAC-ACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGC-GTTATAG 40977
| ||| || | |||| || || | || | |||||| | | || || ||
Sbjct 259657 AAAGACTGTG-ATGCTGACTACACGGGCCAGGGTGTTGATCAACT-CGCTGAAGTGATCC 259600
Query 40978 ATACGATTAAATCCGATCC---CGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAA 41034
||| | | || | | || |||||| || || || || | || ||||| |||
Sbjct 259599 ATAAGTTGAAGACAAACCCATACGATAGAAGA---ATCATTATGAGTGCTTGGAATCCAC 259543
Query 41035 CGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGT----- 41089
| ||| | | ||||||||| ||||| |||||| | || | ||| || || ||
Sbjct 259542 CAGACTTCCCAAAGATGGCATTACCACCATGTCATGTTTTTTCTCAATTCTATGTCAATT 259483
Query 41090 TTGCAA----TGGTG---------AACTGTCATGTCAATTGTATCAAAGATCAGGTGACA 41136
| ||| ||||| |||| || ||| | ||||||| |||||| |||| |
Sbjct 259482 TCCCAAAGGATGGTGGTAAGCCACAACTATCTTGTTTACTGTATCAGAGATCATGTGATA 259423
Query 41137 TGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCAC 41196
|||| || || || || |||||||| || || ||||| | || | ||||||||||
Sbjct 259422 TGGGTCTCGGTGTTCCATTTAACATTGCCTCATACGCTCTCTTGACAAAGATGATTGCAC 259363
Query 41197 ACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACA 41256
| || | | | |||||| ||| ||||||| | || |||| ||| | ||||
Sbjct 259362 AAGTGGTGGACATGGATTGTGGTGAGTTTATTCACACTCTCGGTGATGCTCATGTGTACA 259303
Query 41257 TTAATCACATAGA-GCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACG 41315
| |||| | || || |||| ||||| | | ||| |||| ||| |||| |
Sbjct 259302 GTGATCATGTTGATGCTCTTAA-GGAACAGATTCAAAGAACACCTTATGAATTCCCAAAG 259244
Query 41316 CTACTTATTAAACGCGCTGTTGAAAACATTGATGATTT 41353
|| |||||| | | |||| | |||||||| |||||
Sbjct 259243 CTTAAGATTAAAAGAGATGTTAAGAACATTGACGATTT 259206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455878900125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |