Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq6 150 1e-31 seq2 123 2e-23 seq13 91.5 1e-13 >seq6 Length=680632 Score = 150 bits (166), Expect = 1e-31 Identities = 397/591 (67%), Gaps = 19/591 (3%) Strand=Plus/Plus Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767 ||||| | |||| || ||||| || ||||| ||||| || || | || || || || Sbjct 381815 TTTCCCAATCAAGTACCATGAGATCTGGCAGGCATACAAGAAGGCTGAAGCTTCTTTCTG 381874 Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGCATTAAAACCAC 43826 ||| || || || |||||||| |||| || || ||| |||||| || | | | Sbjct 381875 GACCGCTGAGGAGATTGATTTGTCTAAGGATTT-GCATGATTGGAA--CAACAGATTGAA 381931 Query 43827 A-AGAAA-AACATTTTAT-ATCTTTGGTTTTG--GCGTTTTTTGCTGCGAGCGACGGGAT 43881 |||| ||| ||| | |||| | || || || || ||||| || ||||| || Sbjct 381932 TGAGAATGAACGTTTCTTCATCTCTCGTGTTCTTGCCTTCTTTGCCGCTTCTGACGGTAT 381991 Query 43882 AGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940 || ||||| || |||||| || | | || || || ||| | |||||||| | Sbjct 381992 CGTTAATGAGAACTTGGTTGAGAACTTCTCTGCC-GAGGTGCAAATTCCAGAAGCTAAGT 382050 Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000 |||| || || || ||||| || || || ||||| || || | ||| ||| ||| Sbjct 382051 GTTTCTACGGTTTCCAAATCATGATGGAGAACATTCACTCTGAGACATACTCTCTCTTGA 382110 Query 44001 TAGATACGTACATCAAAGATGGGCACGAGAAGCATCGA--TTGTTTAATGCGATAGAAAC 44058 | || || || ||||| ||| ||| | | || | ||||||||||| || || || Sbjct 382111 TTGACACTTATATCAAGGATC--CACAACAGGCTGAGTATTTGTTTAATGCCATTGAGAC 382168 Query 44059 AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA---ATTCAAATGA 44115 | || ||||| | || || || ||||| | | |||||| || | | | Sbjct 382169 TATTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGAAGAAGC 382228 Query 44116 TTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATC 44175 | || || || ||||||| || ||||| | ||| ||||| || ||||| || || || Sbjct 382229 CTTGTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTTC 382288 Query 44176 GTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAA 44235 ||||| | || || ||||| ||||| ||||||||||||| || ||||| || || || Sbjct 382289 CTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTAA 382348 Query 44236 TGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286 |||||| || | ||||||||||| || || || ||||| || ||||| Sbjct 382349 TGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTTTGCCTGTTTGTT 382399 >seq2 Length=1705267 Score = 123 bits (136), Expect = 2e-23 Identities = 359/543 (66%), Gaps = 16/543 (3%) Strand=Plus/Minus Query 19257 TAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGT 19316 ||| |||||| | | |||||| | | || || | |||||| | || || | | ||| Sbjct 801972 TAAGGAGTTTACCCAGATCTTTAGACGTGCGTTCGCCTCGCGTATCTTCCCTCCTGCTGT 801913 Query 19317 CATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTT 19375 || ||| |||||| || | || || || | ||||| ||||| || |||||| Sbjct 801912 TGTTGAACGATTGGGTATCTCC-CACGTGAAGGGTATGTTGCTCTATGGTCCTCCGGGTA 801854 Query 19376 GTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACAAAAC-AACCTCCCAAA 19434 ||| || ||| | ||||| ||| | || ||||| | || ||| | || ||||| Sbjct 801853 CTGGTAAGACACTCATTGCTAGAAAGATTGGTAAAATGCT--CAATGCTAAGGAACCAAA 801796 Query 19435 -ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACG 19493 ||||| |||||||| ||| |||| || | ||| ||| ||| ||||| || | | Sbjct 801795 GATTGTTAATGGTCCAGAAGTCTTGTCCAAGTTTGTTGGTTCATCCGAAGAGAACATTAG 801736 Query 19494 ACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTC--TTTG 19551 | |||||| || ||||| |||| | | || | | || | | ||| | ||| Sbjct 801735 AAATTTGTTCAAAGATGCTGA-GAAGGAATACAAGGAAAAAGGTG-AGGAGTCCGGTTTA 801678 Query 19552 CACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC------TGGT 19605 ||||| || ||| | ||||| ||||| | | | |||||||||||||| || | Sbjct 801677 CACATCATTATATTTGATGAGTTGGATTCTGTGTTCAAGCAAAGAGGTTCAAGAGGTGAT 801618 Query 19606 GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAAC 19665 | | ||| || ||| | || |||||||| ||| || | || | || ||||| | Sbjct 801617 GGTACTGGTGTCGGTGATAACGTCGTCAATCAGCTCTTGGCCAAGATGGATGGTGTCGAT 801558 Query 19666 CAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCC 19725 ||| |||| || || || || ||||| |||||||| |||| || || || || | ||| Sbjct 801557 CAATTGAACAACATCTTGGTGATTGGTATGACTAACAGACGTGACTTGATTGATAATGCC 801498 Query 19726 TTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGA 19785 | || || || ||||| || || | | |||| || | || || |||||| |||| Sbjct 801497 CTCTTGCGTCCTGGTCGTTTCGAGGTTCAAGTCGAGATCCATTTGCCAGATGAACATGGA 801438 Query 19786 CGT 19788 ||| Sbjct 801437 CGT 801435 >seq13 Length=262405 Score = 91.5 bits (100), Expect = 1e-13 Identities = 408/638 (64%), Gaps = 30/638 (5%) Strand=Plus/Minus Query 40740 GAACTGTTATGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTG 40799 ||||| || |||||||| || || ||| ||| |||||| | ||| ||||||| Sbjct 259837 GAACTATTGTGGTTTATTGCCGGCTGCACTGATGGTAAGAAGCTCAGTGAACAAGGAGTG 259778 Query 40800 CACATTTGGAATGCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGG 40859 | |||||| | | | | || | | ||| | ||| | |||||| ||| | Sbjct 259777 AAGATTTGGGAAGGTAATGGATCAAGAGAATACCTCGATAGTCTTGGATTAACCGATCGT 259718 Query 40860 GATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATAT 40919 |||||||||| | ||||| |||||||| || || | | |||| ||||| || | || Sbjct 259717 CGTGAAGGTGATTTAGGTCCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAGTAC 259658 Query 40920 GAC-ACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGC-GTTATAG 40977 | ||| || | |||| || || | || | |||||| | | || || || Sbjct 259657 AAAGACTGTG-ATGCTGACTACACGGGCCAGGGTGTTGATCAACT-CGCTGAAGTGATCC 259600 Query 40978 ATACGATTAAATCCGATCC---CGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAA 41034 ||| | | || | | || |||||| || || || || | || ||||| ||| Sbjct 259599 ATAAGTTGAAGACAAACCCATACGATAGAAGA---ATCATTATGAGTGCTTGGAATCCAC 259543 Query 41035 CGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGT----- 41089 | ||| | | ||||||||| ||||| |||||| | || | ||| || || || Sbjct 259542 CAGACTTCCCAAAGATGGCATTACCACCATGTCATGTTTTTTCTCAATTCTATGTCAATT 259483 Query 41090 TTGCAA----TGGTG---------AACTGTCATGTCAATTGTATCAAAGATCAGGTGACA 41136 | ||| ||||| |||| || ||| | ||||||| |||||| |||| | Sbjct 259482 TCCCAAAGGATGGTGGTAAGCCACAACTATCTTGTTTACTGTATCAGAGATCATGTGATA 259423 Query 41137 TGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCAC 41196 |||| || || || || |||||||| || || ||||| | || | |||||||||| Sbjct 259422 TGGGTCTCGGTGTTCCATTTAACATTGCCTCATACGCTCTCTTGACAAAGATGATTGCAC 259363 Query 41197 ACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACA 41256 | || | | | |||||| ||| ||||||| | || |||| ||| | |||| Sbjct 259362 AAGTGGTGGACATGGATTGTGGTGAGTTTATTCACACTCTCGGTGATGCTCATGTGTACA 259303 Query 41257 TTAATCACATAGA-GCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACG 41315 | |||| | || || |||| ||||| | | ||| |||| ||| |||| | Sbjct 259302 GTGATCATGTTGATGCTCTTAA-GGAACAGATTCAAAGAACACCTTATGAATTCCCAAAG 259244 Query 41316 CTACTTATTAAACGCGCTGTTGAAAACATTGATGATTT 41353 || |||||| | | |||| | |||||||| ||||| Sbjct 259243 CTTAAGATTAAAAGAGATGTTAAGAACATTGACGATTT 259206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455878900125