Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq9 168 8e-37 seq1 105 8e-18 seq6 95.1 1e-14 >seq9 Length=581722 Score = 168 bits (186), Expect = 8e-37 Identities = 823/1297 (63%), Gaps = 37/1297 (3%) Strand=Plus/Minus Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 |||||||| || || || || |||| |||||||||||| | || ||||| || ||||| Sbjct 354320 GTGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATT 354261 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313 || || | || | ||| | | ||| | | ||| |||| |||| ||| Sbjct 354260 GGAGCAACAAGCAAAGAGTTTCTCAAACCGTACTTGACAATATCAGCCTTAAGAGTATCC 354201 Query 118314 CAGTCGTAG---TTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTT 118368 || || | | | || || ||| |||| | | |||||||| || ||| | Sbjct 354200 CAATCCCACAAATCGGAAGGCTT-TCTTCCCC----AAAGGTCAAACTGAAGCTGACCCT 354146 Query 118369 GGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG-GAG 118427 || ||||| || || | |||| || ||||| || || || || | || ||| Sbjct 354145 TAGAAGCTGGGGAACCTTGGAATGATTCGTATGGACCTTCGGACTTGGCGAGCTCAAGAG 354086 Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCC 118487 | ||| | || |||||||| || || || || || || |||| | |||| ||| Sbjct 354085 AG-GACTCCAAAGCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCC 354027 Query 118488 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 118547 | || || ||||| | | || | | ||||| |||| || | |||||| |||||| Sbjct 354026 TTTTCAGATTCAAATGGCAAACGCAAAATCATAAAGGCATCAGCTAAACCTTGAACACCG 353967 Query 118548 AGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAAAATT 118606 ||| ||||||| | | ||||||||| || || | ||| ||| || || || | || Sbjct 353966 AGGGCAATTGGTCTGTTTCTCATATTGGAGTTTCTAGCT-TCTGGGACTGGGTAGTAGTT 353908 Query 118607 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 118666 | || || | || || | || || ||||||||||| | |||| ||| | ||| Sbjct 353907 ACGGTCAATGATTCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGATGCAAACGTTC 353848 Query 118667 GTAATCAAAACTGCGAGTC---------------TCTTCATTGACATACTTAGGAAGGGC 118711 | | | || | |||| | |||| ||| | || || | || Sbjct 353847 AAAGTTATAAGTCTGAGTGGTACCATCAAGGGATTTTTCAATGAAAG-CT--GGCAATGC 353791 Query 118712 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 118771 || || |||| ||||| |||| || || |||| ||| || | ||| || Sbjct 353790 AATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACA 353731 Query 118772 GCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 118831 |||||||| ||| ||| || | ||||||||||| || || | ||| |||||| || Sbjct 353730 ACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGC 353671 Query 118832 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891 |||||||||||||||| |||| || || ||||| || |||| | || || || | ||| Sbjct 353670 ATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCA 353611 Query 118892 GACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951 | | ||| ||||| | | || || |||| ||| ||||| || || Sbjct 353610 CAACTTTTGAGCCTTGACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAAG 353551 Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAG 119011 || | || || ||||| || | || |||||||| | || ||| |||| | Sbjct 353550 AGCCTTGAATTCATCACCATAACAATCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAA 353491 Query 119012 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 119071 || ||||| |||| |||||| || | |||||| | || |||||||| | || | Sbjct 353490 AGTCCATTCACCATTAGACTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGG 353431 Query 119072 GAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 119130 ||| | ||| ||| | || | ||||| | || ||||| | | || | || | Sbjct 353430 GAACAAATCACGAGCTCTGATC-TCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAAT 353372 Query 119131 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG--AC 119187 | | |||||| |||||||| ||||||| || | || | || ||| | | || Sbjct 353371 CAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTAC 353312 Query 119188 CAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCAT 119247 || | |||| || || | |||||| |||||| ||||||| ||||||||| | ||| | Sbjct 353311 CACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGT 353252 Query 119248 CGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCA 119307 || || || || || ||| ||| | ||||| || | |||||||| | Sbjct 353251 TAGAAGTACCGTTAGTACCAGCAATGTAAGAACCTGTAGCTCTAACGTTATGGATGTGTA 353192 Query 119308 TACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCC 119367 ||| ||||| || || ||| ||||| || || | | | | | | ||||| | Sbjct 353191 AACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATAC 353132 Query 119368 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTG 119427 | ||||| || || | | | || | ||||| || ||||| || || || | Sbjct 353131 CCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGG 353072 Query 119428 TACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 ||||||||||||| | |||||| | |||||| |||| Sbjct 353071 TACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAA 353035 >seq1 Length=2087116 Score = 105 bits (116), Expect = 8e-18 Identities = 191/279 (68%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 167928 ATTGTTTTGCCAGTAGGTGTCTACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAG 167987 |||||| ||||||||| ||| ||||| || || ||| | || || | || |||||| Sbjct 445844 ATTGTT---CCAGTAGGTACCTATGGTCGTGTTGCTCCACGTTCCGGTTTGGCCGTGAAG 445900 Query 167988 AGTGGTATCCAAGTTGGTGCGGGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTC 168047 |||||| | ||||| ||||| |||||| ||||||| | |||||||| || || Sbjct 445901 CACGGTATCTCAACAGGTGCCGGTGTCGTTGATGCAGACTACAGAGGTGAAGTGAAGGTT 445960 Query 168048 GTTCTCTTCAATCACGGGCACACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAA 168107 ||||||||||| ||| | ||| || ||| |||| ||||| || | ||||| || Sbjct 445961 GTTCTCTTCAACCACAGTGACAAGGACTTCTCAATCGCTAAGGGTGACAGAATCGCTCAG 446020 Query 168108 CTCATCTTAGAGAGGTGCGAGACGCCCCAAGTTGAGGAAATTGGTGCGG------TTGAG 168161 ||| | || |||| | | | | | || |||| || |||| | || Sbjct 446021 CTCGTTTTGGAGAAGATTGTCAATGCTGAGATTCAGGAGATCACAGCGGAGGAGCTCGAT 446080 Query 168162 GAGACCGAGAGAGGTTCAGGTGGATTTGGTTCTACAGGT 168200 | || ||||||||| ||||||| || |||||||| ||| Sbjct 446081 AACACTGAGAGAGGTGCAGGTGGTTTCGGTTCTACTGGT 446119 >seq6 Length=680632 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | ||| || |||||| | || | ||||| ||||| || ||| Sbjct 382391 GGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACC 382332 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||| | ||| | |||||||||||||||||| | ||| || |||||||||||||| Sbjct 382331 TGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGAT 382272 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAA 130193 || || ||| || || |||| || | |||| | || || | ||| | ||| Sbjct 382271 ACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAG-GCTTCTTCATCGGCAA 382213 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 130253 ||| ||| ||||| | ||||| |||| ||||| || | |||| || || | || Sbjct 382212 TCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAA 382153 Query 130254 A 130254 | Sbjct 382152 A 382152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435006739000