Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq9 140 4e-28
seq1 125 8e-24
seq6 114 1e-20
>seq9
Length=581722
Score = 140 bits (154), Expect = 4e-28
Identities = 455/702 (65%), Gaps = 6/702 (1%)
Strand=Plus/Plus
Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329
||||| || ||||| | ||||| |||||||||||||||| ||||| ||||||||
Sbjct 353032 TACTTCACCCACGCTTCTCCAACTTTGTTCAACGCTGGTACCCCACACCCACAGATGTCC 353091
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
|| ||||| ||||| |||| || || || ||||| || ||||| ||||| | ||
Sbjct 353092 TCTTGTTTCCTTGTGGCTATGAGAGAAGATTCCATCGAGGGTATCTATGAGACTTTGAAA 353151
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTCCGT 53449
| |||||| ||||||||| | |||||||||||| | ||| | ||||| |
Sbjct 353152 CAATGTGCCTTGATCTCCAAGACCGCTGGTGGTATCGGTTTACACATCCATAACGTTAGA 353211
Query 53450 GCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTC 53509
|| | || | || || || ||||| | | || | | || ||| |
Sbjct 353212 GCTACAGGTTCTTACATTGCTGGTACTAACGGTACTTCTAACGGTTTGATTCCAATGGTT 353271
Query 53510 CGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCG 53569
|| ||||| |||||||| || || |||||| |||| |||||| ||| | || |
Sbjct 353272 CGTGTCTTTAACAACACTGCTCGTTACGTCGACCAAGGTGGTAACAAGAGACCTGGTGCA 353331
Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629
|| ||| | || | || || |||||||| || || | || || |||| | | |
Sbjct 353332 TTTGCCCTTTATTTGGAACCATGGCACGCAGATATCTTTGATTTCATCGACATTAGAAAG 353391
Query 53630 AATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGG 53687
||||| ||| | |||||||| | ||| ||||| |||| |||| ||||||| || |
Sbjct 353392 AATCACGGTAAAGAAGAGATCAGAGCT--CGTGATTTGTTCCCAGCATTGTGGATCCCTG 353449
Query 53688 ACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACG-AG 53746
| | |||||| || || ||| | | || ||| || | | || || | ||
Sbjct 353450 ATTTGTTCATGGAACGTGTTGAGTCTAATGGTGAATGGACTTTGTTCTCTCCAAATGAAG 353509
Query 53747 TGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCA 53806
|| | | | | | ||| || ||||| || || || | | ||| || ||| |
Sbjct 353510 CACCAGGTCTTGCTGATTGT-TATGGTGATGAATTCAAGGCTCTTTATGAGAAGTATGAG 353568
Query 53807 GTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAG 53866
| || || | |||| |||||||| | || | ||| |||||||||| |
Sbjct 353569 AAAGAAGGTCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTATGCAATCCTTGAT 353628
Query 53867 AGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGC 53926
|||| ||||| || || || | |||| ||||||||| | ||||||||||
Sbjct 353629 GCCCAGACTGAGACTGGTACTCCATTCATGCTTTACAAGGATGCCTGTAACGAGAAGACT 353688
Query 53927 AACCAGAAGAACATCGGCGTCATCAAATCGAGCAACTTATGT 53968
|||||||||||| | || | ||||| || ||||| |||
Sbjct 353689 AACCAGAAGAACTTGGGTATGATCAAGTCTTCTAACTTGTGT 353730
Score = 122 bits (134), Expect = 1e-22
Identities = 146/195 (75%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 55734 AGATTT--ACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGA 55791
|||||| || ||| || ||||||||| | || |||| | | || || ||| ||||||
Sbjct 354489 AGATTTGTACAAGACCGTTTGGGAGATTTCTCAAAAGACTATCATCGATATGGCTGCTGA 354548
Query 55792 TCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAA-TCCTTCAC 55850
||||| ||| | ||| || || || || ||| ||||||| ||| ||| ||| |
Sbjct 354549 TCGTGCTGCTTTCATTGATCAATCTCAATCTTTGAACATTCACATT-AGAGCTCCAACTA 354607
Query 55851 TGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGT 55910
||| ||||||| ||| |||||||| ||||| ||||||||||| | ||||| |||||||
Sbjct 354608 TGGGTAAGTTGACCTCTATGCACTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTATGT 354667
Query 55911 ACTATCTGCGGACCC 55925
||||| || | ||||
Sbjct 354668 ACTATTTGAGAACCC 354682
>seq1
Length=2087116
Score = 125 bits (138), Expect = 8e-24
Identities = 287/425 (68%), Gaps = 8/425 (2%)
Strand=Plus/Plus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|||||||| || ||||| ||||||||||||| | ||| || | | |||| |||| |
Sbjct 115188 CCGGTACCAATACCCTCAGCACCGTTGACCAATACCATTGGAATAGTAGGAATGTAAGAA 115247
Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995
|||| || ||| | |||||||||||| ||| |||||| | | ||||| ||
Sbjct 115248 ACCGGTTCAACCAGCTGACCGTCATCCTCGTTGTAAGTCAAAAGAGCACTGTCATCCTTG 115307
Query 151996 TCGAATATCCGTCGA-GTCATAGGACTCAAACGCGTGAAGATGTATCGGG-AGCTGGCCG 152053
| || || | | || || | ||| |||| ||||| || || |||| ||| | |
Sbjct 115308 TGGA-TAACGTTAGAAGTGAGTGGAGCCAAAGCGGTGAAAATATAACGGGGAGCAGAG-G 115365
Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113
||||||| ||||| || | || || || ||| ||| ||| | ||| | ||
Sbjct 115366 CATCCTTACCACCCATCAATCTGGTACCGAAAGCACCATTTGGCAAGAGCAAGTTCAAGT 115425
Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGT--GCCCTGCAGACTCGCTTC 152171
|||| | ||| || || | ||||||||| || | || || | | ||||| |||
Sbjct 115426 TGTTCGAGCCGACAAAGTCCTGAGCCAAGTTGATGATAGTCTGAACCAAAGACTG--TTC 115483
Query 152172 ACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTC 152231
||||||||| || || |||| ||| | ||||| || |||||||| || ||||| || ||
Sbjct 115484 ACCGTGGTGGTAAGCTGTCTTCTCTGAAATGTAACCAGCCAACTGGGCAACCTTGATTTC 115543
Query 152232 CGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACC 152291
|| ||| ||| |||| | ||| | | || | ||| | || ||| ||||||||
Sbjct 115544 ATTCTTCAAGTTTCTCTTCAAACAACCAAACATAATCTTTCTTTGACCTGGCTTCAAACC 115603
Query 152292 GTCCA 152296
||||
Sbjct 115604 ATCCA 115608
Score = 91.5 bits (100), Expect = 2e-13
Identities = 190/276 (69%), Gaps = 18/276 (7%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAG-AGCTTGCAGCATCCTTGCCACC-AGCAAGACGCGTACCGAATT 117362
|||||||| ||||| | ||| | |||||||| ||||| | ||| | ||||||||
Sbjct 115341 GTGAAAATATAACGGGGAGCA-GAGGCATCCTTACCACCCATCAATCTG-GTACCGAAAG 115398
Query 117363 GTCCACTCGGCTCCAAGAG---GTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGT 117419
||| | ||| ||||| ||||| |||||| | ||| ||||||| ||||||||||
Sbjct 115399 CACCATTTGGC---AAGAGCAAGTTCAAGTTGTTCGAGCCGACAAAGTCCTGAGCCAAGT 115455
Query 117420 TGACAATCGT----ACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCC 117475
||| || || ||| || | ||||| ||||| || || |||| ||| |
Sbjct 115456 TGATGATAGTCTGAACCAAAGA----CTGTTCACCGTGGTGGTAAGCTGTCTTCTCTGAA 115511
Query 117476 ACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCA 117535
| ||| || |||| ||| || ||||| || || | ||| ||| |||| | || ||
Sbjct 115512 ATGTAACCAGCCAACTGGGCAACCTTGATTTCATTCTTCAAGTTTCTCTTCAAACAACCA 115571
Query 117536 TAAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571
| || | ||| | |||| |||||||| |||||||
Sbjct 115572 AACATAATCTTTCTTTGACCTGGCTTCAAACCATCC 115607
>seq6
Length=680632
Score = 114 bits (126), Expect = 1e-20
Identities = 379/583 (65%), Gaps = 20/583 (3%)
Strand=Plus/Minus
Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809
|||||| || ||| | |||||||| | || ||||| ||||| || || | | ||
Sbjct 382391 GGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACC 382332
Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGAT---GGCACAGAAGGAACCACTGAAGAA 74866
||||| | || | |||||||||||| || || |||| ||||||||| ||||||
Sbjct 382331 TGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA---AAGGAACCAGAGAAGAA 382275
Query 74867 GATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC--GG----TGCATCGGA 74920
||| ||||| ||| |||||||| ||||| | | ||||| || | ||||||
Sbjct 382274 GATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTCTTCATCGGC 382215
Query 74921 AGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCG 74979
| ||||| || |||||| ||||| ||| | | | || || | ||| || || |
Sbjct 382214 A---ATCCATCTCAAAGCCCAATCAGC-CTTCTTCTTAATACATGGAATAGTCTCAATGG 382159
Query 74980 CTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGT 75039
| | || | | || || |||||||||| ||||||||| || ||||
Sbjct 382158 CATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCAATCAAGAGAGAGT 382099
Query 75040 ACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTG 75099
| ||||| || ||||| ||| | | ||| | |||||||| || || ||||
Sbjct 382098 ATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCTG 382039
Query 75100 CAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGG 75159
||| || || || || || ||| | | ||||| | ||||| ||||| || |
Sbjct 382038 GAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTCAGAAG 381979
Query 75160 CGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGT 75216
|||| || || || || || ||| ||| || |||| ||| | | | ||||
Sbjct 381978 CGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTCATTCAATCTGTTGT 381919
Query 75217 CCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCG 75276
|||||| | || ||| | ||||||||||||||| | ||||||||| | |
Sbjct 381918 TCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAAGAAGCTTCAG 381859
Query 75277 CCTTTTTGTACAAAGACCACAAGTCAGGGTAATTGATTGGAAA 75319
|||| ||||| ||| | ||| |||| |||||||| ||
Sbjct 381858 CCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAA 381816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215828995000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |