Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq9 140 4e-28 seq1 125 8e-24 seq6 114 1e-20 >seq9 Length=581722 Score = 140 bits (154), Expect = 4e-28 Identities = 455/702 (65%), Gaps = 6/702 (1%) Strand=Plus/Plus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| || ||||| | ||||| |||||||||||||||| ||||| |||||||| Sbjct 353032 TACTTCACCCACGCTTCTCCAACTTTGTTCAACGCTGGTACCCCACACCCACAGATGTCC 353091 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 || ||||| ||||| |||| || || || ||||| || ||||| ||||| | || Sbjct 353092 TCTTGTTTCCTTGTGGCTATGAGAGAAGATTCCATCGAGGGTATCTATGAGACTTTGAAA 353151 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTCCGT 53449 | |||||| ||||||||| | |||||||||||| | ||| | ||||| | Sbjct 353152 CAATGTGCCTTGATCTCCAAGACCGCTGGTGGTATCGGTTTACACATCCATAACGTTAGA 353211 Query 53450 GCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTC 53509 || | || | || || || ||||| | | || | | || ||| | Sbjct 353212 GCTACAGGTTCTTACATTGCTGGTACTAACGGTACTTCTAACGGTTTGATTCCAATGGTT 353271 Query 53510 CGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCG 53569 || ||||| |||||||| || || |||||| |||| |||||| ||| | || | Sbjct 353272 CGTGTCTTTAACAACACTGCTCGTTACGTCGACCAAGGTGGTAACAAGAGACCTGGTGCA 353331 Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629 || ||| | || | || || |||||||| || || | || || |||| | | | Sbjct 353332 TTTGCCCTTTATTTGGAACCATGGCACGCAGATATCTTTGATTTCATCGACATTAGAAAG 353391 Query 53630 AATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGG 53687 ||||| ||| | |||||||| | ||| ||||| |||| |||| ||||||| || | Sbjct 353392 AATCACGGTAAAGAAGAGATCAGAGCT--CGTGATTTGTTCCCAGCATTGTGGATCCCTG 353449 Query 53688 ACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACG-AG 53746 | | |||||| || || ||| | | || ||| || | | || || | || Sbjct 353450 ATTTGTTCATGGAACGTGTTGAGTCTAATGGTGAATGGACTTTGTTCTCTCCAAATGAAG 353509 Query 53747 TGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCA 53806 || | | | | | ||| || ||||| || || || | | ||| || ||| | Sbjct 353510 CACCAGGTCTTGCTGATTGT-TATGGTGATGAATTCAAGGCTCTTTATGAGAAGTATGAG 353568 Query 53807 GTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAG 53866 | || || | |||| |||||||| | || | ||| |||||||||| | Sbjct 353569 AAAGAAGGTCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTATGCAATCCTTGAT 353628 Query 53867 AGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGC 53926 |||| ||||| || || || | |||| ||||||||| | |||||||||| Sbjct 353629 GCCCAGACTGAGACTGGTACTCCATTCATGCTTTACAAGGATGCCTGTAACGAGAAGACT 353688 Query 53927 AACCAGAAGAACATCGGCGTCATCAAATCGAGCAACTTATGT 53968 |||||||||||| | || | ||||| || ||||| ||| Sbjct 353689 AACCAGAAGAACTTGGGTATGATCAAGTCTTCTAACTTGTGT 353730 Score = 122 bits (134), Expect = 1e-22 Identities = 146/195 (75%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 55734 AGATTT--ACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGA 55791 |||||| || ||| || ||||||||| | || |||| | | || || ||| |||||| Sbjct 354489 AGATTTGTACAAGACCGTTTGGGAGATTTCTCAAAAGACTATCATCGATATGGCTGCTGA 354548 Query 55792 TCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAA-TCCTTCAC 55850 ||||| ||| | ||| || || || || ||| ||||||| ||| ||| ||| | Sbjct 354549 TCGTGCTGCTTTCATTGATCAATCTCAATCTTTGAACATTCACATT-AGAGCTCCAACTA 354607 Query 55851 TGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGT 55910 ||| ||||||| ||| |||||||| ||||| ||||||||||| | ||||| ||||||| Sbjct 354608 TGGGTAAGTTGACCTCTATGCACTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTATGT 354667 Query 55911 ACTATCTGCGGACCC 55925 ||||| || | |||| Sbjct 354668 ACTATTTGAGAACCC 354682 >seq1 Length=2087116 Score = 125 bits (138), Expect = 8e-24 Identities = 287/425 (68%), Gaps = 8/425 (2%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 |||||||| || ||||| ||||||||||||| | ||| || | | |||| |||| | Sbjct 115188 CCGGTACCAATACCCTCAGCACCGTTGACCAATACCATTGGAATAGTAGGAATGTAAGAA 115247 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995 |||| || ||| | |||||||||||| ||| |||||| | | ||||| || Sbjct 115248 ACCGGTTCAACCAGCTGACCGTCATCCTCGTTGTAAGTCAAAAGAGCACTGTCATCCTTG 115307 Query 151996 TCGAATATCCGTCGA-GTCATAGGACTCAAACGCGTGAAGATGTATCGGG-AGCTGGCCG 152053 | || || | | || || | ||| |||| ||||| || || |||| ||| | | Sbjct 115308 TGGA-TAACGTTAGAAGTGAGTGGAGCCAAAGCGGTGAAAATATAACGGGGAGCAGAG-G 115365 Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113 ||||||| ||||| || | || || || ||| ||| ||| | ||| | || Sbjct 115366 CATCCTTACCACCCATCAATCTGGTACCGAAAGCACCATTTGGCAAGAGCAAGTTCAAGT 115425 Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGT--GCCCTGCAGACTCGCTTC 152171 |||| | ||| || || | ||||||||| || | || || | | ||||| ||| Sbjct 115426 TGTTCGAGCCGACAAAGTCCTGAGCCAAGTTGATGATAGTCTGAACCAAAGACTG--TTC 115483 Query 152172 ACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTC 152231 ||||||||| || || |||| ||| | ||||| || |||||||| || ||||| || || Sbjct 115484 ACCGTGGTGGTAAGCTGTCTTCTCTGAAATGTAACCAGCCAACTGGGCAACCTTGATTTC 115543 Query 152232 CGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACC 152291 || ||| ||| |||| | ||| | | || | ||| | || ||| |||||||| Sbjct 115544 ATTCTTCAAGTTTCTCTTCAAACAACCAAACATAATCTTTCTTTGACCTGGCTTCAAACC 115603 Query 152292 GTCCA 152296 |||| Sbjct 115604 ATCCA 115608 Score = 91.5 bits (100), Expect = 2e-13 Identities = 190/276 (69%), Gaps = 18/276 (7%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAG-AGCTTGCAGCATCCTTGCCACC-AGCAAGACGCGTACCGAATT 117362 |||||||| ||||| | ||| | |||||||| ||||| | ||| | |||||||| Sbjct 115341 GTGAAAATATAACGGGGAGCA-GAGGCATCCTTACCACCCATCAATCTG-GTACCGAAAG 115398 Query 117363 GTCCACTCGGCTCCAAGAG---GTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGT 117419 ||| | ||| ||||| ||||| |||||| | ||| ||||||| |||||||||| Sbjct 115399 CACCATTTGGC---AAGAGCAAGTTCAAGTTGTTCGAGCCGACAAAGTCCTGAGCCAAGT 115455 Query 117420 TGACAATCGT----ACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCC 117475 ||| || || ||| || | ||||| ||||| || || |||| ||| | Sbjct 115456 TGATGATAGTCTGAACCAAAGA----CTGTTCACCGTGGTGGTAAGCTGTCTTCTCTGAA 115511 Query 117476 ACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCA 117535 | ||| || |||| ||| || ||||| || || | ||| ||| |||| | || || Sbjct 115512 ATGTAACCAGCCAACTGGGCAACCTTGATTTCATTCTTCAAGTTTCTCTTCAAACAACCA 115571 Query 117536 TAAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571 | || | ||| | |||| |||||||| ||||||| Sbjct 115572 AACATAATCTTTCTTTGACCTGGCTTCAAACCATCC 115607 >seq6 Length=680632 Score = 114 bits (126), Expect = 1e-20 Identities = 379/583 (65%), Gaps = 20/583 (3%) Strand=Plus/Minus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || ||| | |||||||| | || ||||| ||||| || || | | || Sbjct 382391 GGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACC 382332 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGAT---GGCACAGAAGGAACCACTGAAGAA 74866 ||||| | || | |||||||||||| || || |||| ||||||||| |||||| Sbjct 382331 TGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA---AAGGAACCAGAGAAGAA 382275 Query 74867 GATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC--GG----TGCATCGGA 74920 ||| ||||| ||| |||||||| ||||| | | ||||| || | |||||| Sbjct 382274 GATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTCTTCATCGGC 382215 Query 74921 AGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCG 74979 | ||||| || |||||| ||||| ||| | | | || || | ||| || || | Sbjct 382214 A---ATCCATCTCAAAGCCCAATCAGC-CTTCTTCTTAATACATGGAATAGTCTCAATGG 382159 Query 74980 CTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGT 75039 | | || | | || || |||||||||| ||||||||| || |||| Sbjct 382158 CATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCAATCAAGAGAGAGT 382099 Query 75040 ACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTG 75099 | ||||| || ||||| ||| | | ||| | |||||||| || || |||| Sbjct 382098 ATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCTG 382039 Query 75100 CAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGG 75159 ||| || || || || || ||| | | ||||| | ||||| ||||| || | Sbjct 382038 GAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTCAGAAG 381979 Query 75160 CGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGT 75216 |||| || || || || || ||| ||| || |||| ||| | | | |||| Sbjct 381978 CGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTCATTCAATCTGTTGT 381919 Query 75217 CCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCG 75276 |||||| | || ||| | ||||||||||||||| | ||||||||| | | Sbjct 381918 TCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAAGAAGCTTCAG 381859 Query 75277 CCTTTTTGTACAAAGACCACAAGTCAGGGTAATTGATTGGAAA 75319 |||| ||||| ||| | ||| |||| |||||||| || Sbjct 381858 CCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAA 381816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215828995000