Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq5 154 2e-32 seq9 140 4e-28 seq16 136 5e-27 seq7 132 5e-26 >seq5 Length=1064489 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| | || || ||||||||||| ||||| |||||||| Sbjct 816110 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTTGAAGTTGAGTCCTCC 816169 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || ||||||||||||||||| ||||| || |||||| Sbjct 816170 GACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAG 816229 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || |||||||| |||||||| ||||| |||| | ||||| | ||||| || Sbjct 816230 CAGAGACTTATTTTTGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAAC 816289 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | || ||||| ||||||||||| Sbjct 816290 ATTCAGAAGGAGTCCACTCTTCA 816312 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | || || ||||||||||| || |||||||| || | Sbjct 816566 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 816625 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| |||| ||||| |||||||| || ||||| || |||||| Sbjct 816626 GACACTATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 816685 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || |||||||||||||| || ||||||| | | || | | ||||| || Sbjct 816686 CAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACTTTGTCCGACTACAAC 816745 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | || ||||| ||||||||||| Sbjct 816746 ATTCAGAAGGAGTCCACTCTTCA 816768 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | || || ||||||||||| || ||||||||||| Sbjct 816338 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 816397 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||| |||| || |||||||||||||| || || || |||||| Sbjct 816398 GATACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 816457 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| |||||||| || || |||| | | ||||| | ||||| || Sbjct 816458 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAAC 816517 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | || ||||| || || ||||| Sbjct 816518 ATTCAGAAGGAGTCGACCCTTCA 816540 Score = 107 bits (118), Expect = 2e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 27452 AGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAA 27511 |||||||||| || | |||| || | ||| | || ||||||||||||||||| | Sbjct 815928 AGGTTGAGTCCTCCGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTA 815987 Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571 | || || || |||||| | || || ||||| |||||||| || ||||||| | | |||| Sbjct 815988 TCCCGCCTGATCAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCC 816047 Query 27572 TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 | | ||||| || |||| ||||| ||||| ||||| Sbjct 816048 TTTCCGACTACAACATCCAGAAGGAGTCCACCCTTCA 816084 >seq9 Length=581722 Score = 140 bits (154), Expect = 4e-28 Identities = 536/837 (64%), Gaps = 15/837 (2%) Strand=Plus/Minus Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966 ||| |||| || || || || || ||||| | || | | ||||| || || || Sbjct 353787 GGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACAACA 353728 Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026 ||| ||||||||||| || |||||| ||| |||||||| | ||| |||| || || || Sbjct 353727 CAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATC 353668 Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAAT 81086 |||||| |||| | || ||||| ||||| ||| | | ||||| || | ||| | Sbjct 353667 CTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCACAA 353608 Query 81087 CTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTC 81146 || | |||||||| ||| | ||||| | ||||||| | ||| | Sbjct 353607 CTTTTGAGCCTTGACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAAGAGC 353548 Query 81147 GTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTG 81206 | ||| | |||| | | |||| || |||| || || || | | || Sbjct 353547 CTTGAATTCATCACCATAACAATCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGT 353488 Query 81207 CCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAA 81266 ||| || | ||| ||| | |||||| ||||||||||| | || | ||| Sbjct 353487 CCATTCACCATTAGACTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAA 353428 Query 81267 CAGGTCGCGGCAGCGCGC--CTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCC 81324 || || || ||| | ||| || | ||| || || | | |||| || || Sbjct 353427 CAAATCACG--AGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCA 353370 Query 81325 ATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC------CTTGCGACGG 81378 | ||| || || |||||||| |||| ||| | ||| | | || |||| || Sbjct 353369 AAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTAC-- 353312 Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438 |||| |||| ||||||||| ||||| |||||| ||||| | ||| || || | ||| Sbjct 353311 -CACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCG 353253 Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497 | || |||||| ||||| | || || || | || | || || ||| || Sbjct 353252 TTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCTGTAGCTCTAACGTTATGGATGTGT 353193 Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557 || |||||| ||||| | ||| || ||| ||||| | |||| |||||||| || Sbjct 353192 AA-ACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGAT 353134 Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617 ||||||||| ||||| | |||| | | | |||||| |||||||| ||| | Sbjct 353133 ACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGG 353074 Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677 | || || ||||||| ||||| | ||||| |||| || | | ||||| |||| Sbjct 353073 GGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTT 353014 Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCAT 81734 ||| || || | || | |||||| ||| || ||||||||||| || | ||| Sbjct 353013 ATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCAT 352957 Score = 107 bits (118), Expect = 2e-18 Identities = 139/187 (74%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| | || | || ||||||||| || ||||| | ||||||||||| ||||| | |||| Sbjct 354686 GCCTGGGTTCTCAAATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGC 354627 Query 80092 ATAGAACTGAGCTT-CGCA-AGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACT 80149 ||||| | | ||| | || ||| ||| | ||| ||| ||||||| ||| ||||| | Sbjct 354626 ATAGAGGTCAACTTACCCATAGT-TGGAGCTCT-AATGTGAATGTTCAAAGATTGAGATT 354569 Query 80150 GACAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCC 80209 || |||||||| ||||||| || ||||| || || || | |||||| | ||| |||| Sbjct 354568 GATCAATGAAAGCAGCACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTCCC 354509 Query 80210 ATACTGT 80216 | || || Sbjct 354508 AAACGGT 354502 >seq16 Length=161790 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || || ||||| || ||| | ||||||||||| Sbjct 4346 ATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTCC 4405 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || || |||||||| || || || || || |||||| Sbjct 4406 GACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCAG 4465 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| |||||||| || ||||||| | | ||||| | ||||| || Sbjct 4466 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAAC 4525 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | || ||||| ||||| ||||| Sbjct 4526 ATTCAGAAGGAGTCCACCCTTCA 4548 >seq7 Length=598726 Score = 132 bits (146), Expect = 5e-26 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || || ||||| | ||||| ||||| ||||| | ||||||||||| ||| | |||| Sbjct 431899 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 431840 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| || || || ||||||||| | || Sbjct 431839 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACTT 431780 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || || |||||||| |||||||| | | | ||||| | ||||| || |||| ||| Sbjct 431779 ATCTTCGCCGGTAAGCAGCTCGAGGACGGTAGAACCCTTTCTGACTACAACATCCAGAAG 431720 Query 27595 GAATCCACTCTTCATCTAGTC 27615 || |||||| | ||| | ||| Sbjct 431719 GAGTCCACTTTGCATTTGGTC 431699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310221778000