Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq5 107 1e-18
seq7 96.9 2e-15
seq16 89.7 3e-13
>seq5
Length=1064489
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || |||||| |||||| |||||||| || || ||
Sbjct 816336 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 816277
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | ||||| || || ||||||||||| || | | ||| ||||| || ||
Sbjct 816276 AGGGTTCTGCCATCTTCGAGCTGCTTACCGGCAAAAATAAGTCTCTGCTGGTCAGGTGGA 816217
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| ||| || | || ||| | ||| ||||| | ||| ||
Sbjct 816216 ATACCCTCCTTGTC-CTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAGGACTCAAC 816158
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || || ||||| || || || ||||| ||||| |||||
Sbjct 816157 TTCAAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 816110
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || || || |||||| |||||||| || || ||
Sbjct 816564 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAG 816505
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | |||||||| || ||||||||||| || | | ||| ||||| || ||
Sbjct 816504 AGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 816445
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | |||||| | ||| || || | ||| ||
Sbjct 816444 ATACCCTCCTTGTCCTGGATC-TTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAAC 816386
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || || ||||| || || || || ||||| ||||||||
Sbjct 816385 CTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 816338
Score = 84.2 bits (92), Expect = 1e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || || ||| |||||| || ||||| || || |||
Sbjct 816108 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 816049
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | || ||||| || ||||||||||| || | | ||| || || |||||
Sbjct 816048 AGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGGG 815989
Query 34600 ACTCCCTCCTTGTC 34613
| |||||||||||
Sbjct 815988 ATACCCTCCTTGTC 815975
>seq7
Length=598726
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||||||| | |||| |||||| || ||||| || || ||||| |||| |||| ||
Sbjct 431700 ACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCCTCG 431759
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| || |||||||| || || | | ||| ||||| || || | ||||||||||| |
Sbjct 431760 AGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGG 431819
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
||| || | || ||| | ||| ||||| | ||| || |||| ||| || || ||
Sbjct 431820 ATC-TTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTT 431878
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCA 34705
|||||| || || || || ||| |||||
Sbjct 431879 ACCGGTCAAGGTCTTAACGAAA--CTGCA 431905
>seq16
Length=161790
Score = 89.7 bits (98), Expect = 3e-13
Identities = 152/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
|||||| || || ||| |||||| |||||||| || || ||||| |||| | || ||
Sbjct 4555 CACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACCATCCTC 4496
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
||| || ||||||||||| || | | ||| ||||| || || | || || |||||
Sbjct 4495 AAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTTGTCCTG 4436
Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
|||| || | || || | ||| ||||| ||| || |||| || || || |
Sbjct 4435 GATC-TTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGATGGTCT 4377
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATT 34713
|||| || | || || ||||| |||||||| ||| ||
Sbjct 4376 TACCCGTGAGGGTCTTAACAAAGATCTGCATCTTGGTT 4339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729504105825
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |