Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq5 122 8e-23 seq16 107 2e-18 >seq5 Length=1064489 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||| || ||| ||||||| |||||||| || | ||| Sbjct 816110 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTTGAAGTTGAGTCCTCC 816169 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| ||||| || || || ||||| || || Sbjct 816170 GACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAG 816229 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| || || | ||||| | ||| | ||||| |||||| Sbjct 816230 CAGAGACTTATTTTTGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAAC 816289 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | || ||||||||| | ||| | ||||| || Sbjct 816290 ATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTAT 816339 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||| || ||| ||||||| || || || || | ||| Sbjct 816338 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 816397 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || || || ||||| || || || ||||| || || Sbjct 816398 GATACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 816457 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| || || | ||||| || ||| | ||||| |||||| Sbjct 816458 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAAC 816517 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||||||| | || ||||||||| | ||| | ||||| || Sbjct 816518 ATTCAGAAGGAGTCGACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTAT 816567 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||| || ||| ||||||| || || || ||| | || Sbjct 816566 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 816625 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || ||||||||||| ||||| || ||||| || || Sbjct 816626 GACACTATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 816685 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | || || || || | ||||| |||||| Sbjct 816686 CAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACTTTGTCCGACTACAAC 816745 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| |||||||| || | || ||||| ||| | ||| | ||||| Sbjct 816746 ATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 816792 >seq16 Length=161790 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || ||| | || ||| | || || || | ||| Sbjct 4346 ATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTCC 4405 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || ||||||||||| || ||||| || || Sbjct 4406 GACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCAG 4465 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| || || | || || || ||| |||| || |||||| Sbjct 4466 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAAC 4525 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| |||||||| ||| | || ||||| | | ||| | ||||| Sbjct 4526 ATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGG 4572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918264088000