Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq16 120 7e-22 seq5 120 7e-22 seq7 104 5e-17 >seq16 Length=161790 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || | ||||| || ||||| || || |||||||| || | | ||||| || Sbjct 4561 TCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACC 4502 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || || || ||||| |||||||| ||||||||||| | | ||| ||||| || Sbjct 4501 ATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTT 4442 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || || || |||||| | || | |||| ||| ||| || || | ||| || Sbjct 4441 GTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGAT 4382 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || |||||||| ||||| || |||| |||||| || Sbjct 4381 GGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCTT 4343 >seq5 Length=1064489 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| || || |||||||| |||| | ||||| |||||||| | Sbjct 816316 CAAG-TGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCGA 816258 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| || ||||| ||||||||||| | | || || ||||| || |||| Sbjct 816257 GCTGCTTACCGGCAAAAATAAGTCTCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAA 816198 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| |||||||| |||||||| || | Sbjct 816197 TCTTGGACTTGACGTTGTCAATAGTGTCGGAGGACTCAACTTCAAGTGTAATAGTCTTAC 816138 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||||||||| | ||||| Sbjct 816137 CAGTCAAGGTCTTCACGAAAATTTGCAT 816110 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| || || |||||||| |||| |||||||| ||||| || | Sbjct 816772 CAAG-TGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAAAGTTCTACCATCCTCAA 816714 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || |||||||| ||||||||||| | | || |||||||| ||||||| Sbjct 816713 GCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAA 816654 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | |||| || || || || || |||||||| || | Sbjct 816653 TCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACCTCGAGTGTAATAGTCTTAC 816594 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| || |||| |||||| Sbjct 816593 CAGTCAAGGTCTTGACAAAGATCTGCAT 816566 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || || |||||||| |||| | ||||| |||||||| | Sbjct 816544 CAAG-TGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATCTTCAA 816486 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| |||||||| ||||||||||| | | ||| || ||||| || || | Sbjct 816485 GCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 816426 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | | || || ||| || || || |||||||| || | Sbjct 816425 TCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAACCTCGAGTGTAATAGTCTTAC 816366 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| || |||| |||||| Sbjct 816365 CAGTCAAGGTCTTGACAAAGATCTGCAT 816338 Score = 89.7 bits (98), Expect = 1e-12 Identities = 95/124 (77%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| |||| | ||||| ||||| || | Sbjct 816088 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTACCATCCTCAA 816030 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| |||||||| |||||||| || | || ||| || ||||| || |||| Sbjct 816029 GCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGGGATACCCTCCTTGTCCTGAA 815970 Query 152017 TTTT 152020 | || Sbjct 815969 TCTT 815966 >seq7 Length=598726 Score = 104 bits (114), Expect = 5e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||||||||| | ||| | ||| ||||| || ||||||||||| || | | ||||| || Sbjct 431693 TCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACC 431752 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 || || || || |||||||||||||| ||||||||||| | | ||| || ||||| Sbjct 431753 GTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTT 431812 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || || || ||||| | || | | |||| || ||| || || | ||||| Sbjct 431813 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 431872 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAA 152095 || || || || | ||||| ||||| Sbjct 431873 GGTCTTACCGGTCAAGGTCTTAACGAA 431899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820430416775