Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq5 143 6e-29 seq7 134 3e-26 seq16 123 6e-23 >seq5 Length=1064489 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| || | || || || || || || || || || || ||| ||| Sbjct 816113 CAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTTGAAGTTGAGTCCTCCGAC 816172 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| |||||||||||||| || || || || || |||||||| Sbjct 816173 ACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAGCAG 816232 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||| || ||||| || |||||||||||||| || || || |||| || ||| | Sbjct 816233 AGACTTATTTTTGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAACATT 816292 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || || || || || | ||||||||| | ||| Sbjct 816293 CAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGA 816331 Score = 127 bits (140), Expect = 5e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 177953 AACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCA 178012 ||| || || || |||| || ||| ||||| || || |||||||| |||||||| Sbjct 815914 AACAATAACATTCTAGGTTGAGTCCTCCGACACTATTGACAACGTCAAGTCCAAGATTCA 815973 Query 178013 GGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGA 178072 |||||| || || ||||| || || ||||| |||||||||| ||||| || ||||| || Sbjct 815974 GGACAAGGAGGGTATCCCGCCTGATCAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGA 816033 Query 178073 AGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| || || ||| |||| || ||| |||| || || || || || || | ||||| Sbjct 816034 GGATGGTAGAACCCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTCACTTGGTTTT 816093 Query 178133 GAGACTCAGA 178142 |||| | ||| Sbjct 816094 GAGATTGAGA 816103 >seq7 Length=598726 Score = 134 bits (148), Expect = 3e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 |||||| || || | || || || || || ||| | ||||| || ||| |||||||| Sbjct 431900 TTTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCAT 431841 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 || |||||||| ||||| |||||||| || || ||||| || |||||||| |||| Sbjct 431840 TGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACT 431781 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||||||| || |||||||| || || || || ||| | || || ||| |||| || Sbjct 431780 TATCTTCGCCGGTAAGCAGCTCGAGGACGGTAGAACCCTTTCTGACTACAACATCCAGAA 431721 Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || ||||| | || | ||| | ||| Sbjct 431720 GGAGTCCACTTTGCATTTGGTCCTCAGATTGAGA 431687 >seq16 Length=161790 Score = 123 bits (136), Expect = 6e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || ||||| | ||||| || || ||| Sbjct 4349 CAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTCCGAC 4408 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| |||||||||||||| ||||| || |||||||| Sbjct 4409 ACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCAGCAG 4468 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||| ||||| || ||||| || ||||| || || ||| | || || ||| | Sbjct 4469 AGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAACATT 4528 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 4529 CAGAAGGAGTCCACCCTTCA-CTTG 4552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730814429850