Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq6 163 3e-35 >seq6 Length=1261692 Score = 163 bits (180), Expect = 3e-35 Identities = 570/877 (65%), Gaps = 21/877 (2%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||||||||| || | || ||||| ||||| || || || | || || || |||| Sbjct 58797 TTTGGTAATCAGAGACTCTCTTCTCGAAGAAGTTTGTCTTACCAGCAAGGGAGATGTTCT 58738 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 |||| || || || || || ||| | || | | || | | |||| ||| | ||| Sbjct 58737 CCATAAAGTCGAATGGGTTTGTATCGTTGTAGAACTTCTTGT-TACCA-AGTGCAACGAG 58680 Query 16792 TAATCTATCCGCTACAAATTCTATA-TATTGGCACATTAATTCGCAGTTCATTCCTATAA 16850 |||||||| || ||| | |||| ||||| ||||| || | |||||||| || | | Sbjct 58679 CAATCTATCAGC-ACAGAATCTAACGTATTGACACATCAACTTACAGTTCATACCCAAGA 58621 Query 16851 GACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA 16910 || | |||||||| || || || | | || || | || ||||| | || | Sbjct 58620 GAGACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATGA 58561 Query 16911 TACTAGCAACTCGTTCCTCGGACGG--TGTATGTTTAAGATGTTTAAACATCAGACATGC 16968 | || |||| || | || ||| | || ||| || ||||| || ||| || Sbjct 58560 TTCTCTCAACAATCTCTGGTGCTGGCTTGT-TCTTCAAG-TGGGCAAACAACAAACAAGC 58503 Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028 ||||||| ||||| || ||||| | || || | |||||||| || ||||| || || Sbjct 58502 GAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTGG 58443 Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088 |||| |||| ||||| |||||||| || | |||||| || || || ||||| ||||| Sbjct 58442 CATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATACC 58383 Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148 || || | ||||| || | | || || || | ||||| | | |||||| Sbjct 58382 TTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCAATCCA 58323 Query 17149 TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208 | || |||| || || || | ||| || || || ||||| ||||| || || || Sbjct 58322 TCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTGAACAA 58263 Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268 ||| |||| | |||| | || || || ||||| | | | ||| | || || Sbjct 58262 GAACTCAGCCTCCTTTGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAAGTCTCAGA 58203 Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328 ||| ||||||||||| ||||| || || || ||||| || || | |||||||| Sbjct 58202 GTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGGGATTTGAAC 58143 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388 || | |||| ||| | | || ||||| ||||| ||||| ||||| ||||| Sbjct 58142 CTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGCGGCAAAAAA 58083 Query 17389 CGCCAATA----TATGCTTAATGAAA---TATTTTTCGTCCGGTGTAAGAACGCGCCAGT 17441 |||| | | | | || |||| | || |||| | | | | ||||| Sbjct 58082 GGCCAGCACTCTTGAGATGAA-GAAACGCTCGTTCTCGTTCAATCT---GTTGTTCCAGT 58027 Query 17442 CCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTT 17501 | | ||||| || |||| ||| | || |||| ||||| || |||| | ||||| | Sbjct 58026 CGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAGCCTTCT 57967 Query 17502 TATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 ||||| | |||||| |||| ||| | || ||||| Sbjct 57966 TATACGCTTGCCAAATCTCATGGTACTTAATAGGGAA 57930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545554714760