Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq6 167 2e-36 >seq6 Length=1261692 Score = 167 bits (184), Expect = 2e-36 Identities = 575/889 (65%), Gaps = 31/889 (3%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||||||| || | || ||||||||||| || || || | | || || || | Sbjct 58797 TTTGGTAATCAGAGACTCTCTTCTCGAAGAAGTTTGTCTTACCAGCAAGGGAGATGTTCT 58738 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAA-AATATCTTAGAGTACCCCAGTTCCGTAA 16028 ||||||| || || || || ||| | || | || |||| || || ||| | | Sbjct 58737 CCATAAAGTCGAATGGGTTTGTATCGTTGTAGAACTTCTT---GTTACCAAGTGCAACGA 58681 Query 16029 CTAATCTATCTGCTACAAATTCTATA-TATTGACACATTAAGTCGCAATTAATTCCTATA 16087 |||||||| || ||| | |||| ||||||||||| || | || || || || | Sbjct 58680 GCAATCTATCAGC-ACAGAATCTAACGTATTGACACATCAACTTACAGTTCATACCCAAG 58622 Query 16088 AGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATG 16147 || | |||||||| | ||| || | | | ||| ||| | || ||||| | ||| Sbjct 58621 AGAGACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATG 58562 Query 16148 AT------ATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGA 16201 || | | | || ||| | || | | || | ||| ||||| | | Sbjct 58561 ATTCTCTCAACAATCTCTGGTGCT------GGCTTGTTCTTCAAGTGGGCAAACAACAAA 58508 Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 || ||||| ||| |||| |||||||| | || || | ||||| || || || || Sbjct 58507 CAAGCGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAA 58448 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321 |||||||| |||| ||||| ||||| || || | || ||||| || || ||||| Sbjct 58447 CCTGGCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAG 58388 Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381 ||||| ||||||| |||||||| | | || || || | || || | || | Sbjct 58387 ATACCTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCA 58328 Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTA 16441 |||||| || |||| || || || | || ||||| || ||||| ||||| || Sbjct 58327 ATCCATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTG 58268 Query 16442 AACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATT 16501 ||||| ||| |||| || | || || || || |||| || ||| | Sbjct 58267 AACAAGAACTCAGCCTCCTTTGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAAGTC 58208 Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || ||||| |||||||| || ||||| || ||||||||||| |||||| | ||| Sbjct 58207 TCAGAGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGGGATT 58148 Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || || || | | || ||| ||| |||||| || |||||||||||| || ||| Sbjct 58147 TGAACCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGCGGCA 58088 Query 16622 AAAAACGCCAATA----TGTGCTTAATGAAA---TATTTTTCGTCAGATGTAAGAATATG 16674 ||||| |||| | || | | || |||| | || |||| || | | | Sbjct 58087 AAAAAGGCCAGCACTCTTGAGATGAA-GAAACGCTCGTTCTCGTTCAATCT---GTTGTT 58032 Query 16675 CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGC 16734 ||| || | ||||| || |||| ||| | || || | ||||| ||| |||| | || Sbjct 58031 CCAGTCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAGC 57972 Query 16735 CTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACG 16783 ||| |||||| || |||||| |||| ||| | || || || | |||| Sbjct 57971 CTTCTTATACGCTTGCCAAATCTCATGGTACTTAATAGGGAAGAGGACG 57923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414355251240