Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq6 167 2e-36
>seq6
Length=1261692
Score = 167 bits (184), Expect = 2e-36
Identities = 575/889 (65%), Gaps = 31/889 (3%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
||||||||||| || | || ||||||||||| || || || | | || || || |
Sbjct 58797 TTTGGTAATCAGAGACTCTCTTCTCGAAGAAGTTTGTCTTACCAGCAAGGGAGATGTTCT 58738
Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAA-AATATCTTAGAGTACCCCAGTTCCGTAA 16028
||||||| || || || || ||| | || | || |||| || || ||| | |
Sbjct 58737 CCATAAAGTCGAATGGGTTTGTATCGTTGTAGAACTTCTT---GTTACCAAGTGCAACGA 58681
Query 16029 CTAATCTATCTGCTACAAATTCTATA-TATTGACACATTAAGTCGCAATTAATTCCTATA 16087
|||||||| || ||| | |||| ||||||||||| || | || || || || |
Sbjct 58680 GCAATCTATCAGC-ACAGAATCTAACGTATTGACACATCAACTTACAGTTCATACCCAAG 58622
Query 16088 AGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATG 16147
|| | |||||||| | ||| || | | | ||| ||| | || ||||| | |||
Sbjct 58621 AGAGACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATG 58562
Query 16148 AT------ATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGA 16201
|| | | | || ||| | || | | || | ||| ||||| | |
Sbjct 58561 ATTCTCTCAACAATCTCTGGTGCT------GGCTTGTTCTTCAAGTGGGCAAACAACAAA 58508
Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261
|| ||||| ||| |||| |||||||| | || || | ||||| || || || ||
Sbjct 58507 CAAGCGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAA 58448
Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321
|||||||| |||| ||||| ||||| || || | || ||||| || || |||||
Sbjct 58447 CCTGGCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAG 58388
Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381
||||| ||||||| |||||||| | | || || || | || || | || |
Sbjct 58387 ATACCTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCA 58328
Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTA 16441
|||||| || |||| || || || | || ||||| || ||||| ||||| ||
Sbjct 58327 ATCCATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTG 58268
Query 16442 AACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATT 16501
||||| ||| |||| || | || || || || |||| || ||| |
Sbjct 58267 AACAAGAACTCAGCCTCCTTTGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAAGTC 58208
Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561
|| ||||| |||||||| || ||||| || ||||||||||| |||||| | |||
Sbjct 58207 TCAGAGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGGGATT 58148
Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621
|| || || | | || ||| ||| |||||| || |||||||||||| || |||
Sbjct 58147 TGAACCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGCGGCA 58088
Query 16622 AAAAACGCCAATA----TGTGCTTAATGAAA---TATTTTTCGTCAGATGTAAGAATATG 16674
||||| |||| | || | | || |||| | || |||| || | | |
Sbjct 58087 AAAAAGGCCAGCACTCTTGAGATGAA-GAAACGCTCGTTCTCGTTCAATCT---GTTGTT 58032
Query 16675 CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGC 16734
||| || | ||||| || |||| ||| | || || | ||||| ||| |||| | ||
Sbjct 58031 CCAGTCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAGC 57972
Query 16735 CTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACG 16783
||| |||||| || |||||| |||| ||| | || || || | ||||
Sbjct 57971 CTTCTTATACGCTTGCCAAATCTCATGGTACTTAATAGGGAAGAGGACG 57923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414355251240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |