Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq5 266 4e-66
seq4 163 3e-35
>seq5
Length=1517892
Score = 266 bits (294), Expect = 4e-66
Identities = 642/970 (66%), Gaps = 4/970 (0%)
Strand=Plus/Minus
Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764
||||| ||||||| |||||||| || ||||| | | | | || | | ||||||
Sbjct 776052 GCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTCA 775993
Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824
|| | || | |||||||| | || || || | ||||| ||||||||||||
Sbjct 775992 CAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTTACAA 775933
Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884
||||| |||||||| |||||||| |||||||||||| |||| | || | ||||| | |
Sbjct 775932 GCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCATAC 775873
Query 53885 CAGACGACACGAGCCTTTATTATAGATTTGTATCTCT--TTTCTCTTTCGTATAGTGTAT 53942
|||| ||||||| | | ||| | || | |||| |||||| |||||
Sbjct 775872 CAGAGCTTTTGAGCCTTCACAGT--CTTTCTTCCTTTACCTTCTTGTTCGTACTTTGTAT 775815
Query 53943 ACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 54002
||||| |||||| || || || | ||| |||| |||| | |||| ||| | |
Sbjct 775814 ACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGAGA 775755
Query 54003 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 54062
|| | ||| || |||| | | || || ||||| || ||||| |||||||| | |
Sbjct 775754 ATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAAGG 775695
Query 54063 CTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 54122
|| || | ||| | | ||| || || || || |||||| | | ||||| ||
Sbjct 775694 CTGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATATCGATGA 775635
Query 54123 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGT 54182
| | | ||||| | ||||| || |||||||| | || | | || || | ||||
Sbjct 775634 AATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCTTGT 775575
Query 54183 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 54242
| || || || || | |||||| || ||||||||| | || | | ||| ||||| | ||
Sbjct 775574 TACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCAAAC 775515
Query 54243 CATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 54302
|||| || | ||| ||||| || | ||| ||| || | | ||||| |||
Sbjct 775514 CATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACTTCTGATATTGTGAATGT 775455
Query 54303 ATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 54362
| ||| || || || || | |||||||| || || ||| | || || || || ||||
Sbjct 775454 GCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGTAGA 775395
Query 54363 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 54422
| || || || || ||| |||| || || ||||| ||||| || | |
Sbjct 775394 TACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTGGGCTTG 775335
Query 54423 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 54482
||| || ||||| || || || ||||||||||| || || | |||||| | || |
Sbjct 775334 GAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCAGGT 775275
Query 54483 TGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 54542
|||| || || || | || | ||||| | || || || | || |||||||| |
Sbjct 775274 TGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCACACGCATCA 775215
Query 54543 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCA 54602
|| |||||| || | || | | ||| ||| | | | |||||||||||| | ||||
Sbjct 775214 CCAAGTGCTGTGGACGCTCGGCAACTTTGCCGTTCACTCTGAGCAAGTAGGATCTCTCCA 775155
Query 54603 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGA 54662
| || || |||||||| |||||||| ||||||| ||||| | ||| | ||||| |
Sbjct 775154 ATGTCTTGAAACCAAAGTAGTTGTAGTTGAAGTCTCTGTCGTAGACAATGGCAGAGTTCA 775095
Query 54663 GTTTATCCTT 54672
| ||||||
Sbjct 775094 ACTCATCCTT 775085
Score = 84.2 bits (92), Expect = 3e-11
Identities = 171/248 (69%), Gaps = 6/248 (2%)
Strand=Plus/Minus
Query 52807 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 52866
|||||||||||| | ||| ||||||| || || | | |||||||| || || || |
Sbjct 776971 TGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGTCTTCAA 776912
Query 52867 ACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTT-GGAATAACT-CGGATCTGCT 52924
|| |||| ||||| || ||||| || ||||| || | || ||||
Sbjct 776911 GCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTACCCATGGTTGGGGCTCTG-- 776854
Query 52925 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 52984
||||| || |||| ||||||| ||| |||||| | || | | || |||||||| |
Sbjct 776853 ATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCAGCCATATCA 776794
Query 52985 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 53043
||||| |||||||| | |||||||| | || || || || || | ||| ||| |||
Sbjct 776793 ATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAAGTCCTTCAATTGCTT-TGG 776735
Query 53044 AAGGTTTG 53051
|| |||||
Sbjct 776734 AATGTTTG 776727
>seq4
Length=1931745
Score = 163 bits (180), Expect = 3e-35
Identities = 392/582 (67%), Gaps = 17/582 (3%)
Strand=Plus/Minus
Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 53770
|| || ||||||||||| || | || | ||| ||| || | || ||| |||
Sbjct 969721 GAAGCTAGATTACAAACAGCAATTTCTTCTGCAGAACTATACTGAACAATTTCACAGCAT 969662
Query 53771 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 53830
|| || | | ||||| ||||| || |||| ||| || ||||| |||||||| || |||
Sbjct 969661 AGGTTTGAAGATTTGATTGTTCCCAAGTTTTTTTGGTTGCTCTTCTTGTTACAAGCGTCC 969602
Query 53831 TTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACG 53890
|||||||| ||||||||| ||||||||| | ||| |||| ||| || ||||||| |
Sbjct 969601 TTATAAAGCATGAATGGCCCACCAGTTTCCACTTGGCTCTCTAAAATGGCGTTCCAGA-G 969543
Query 53891 ACAC-GAGCCTTTATTATAGATTTGTATCT---CTTTTCTCTTTCGTATAGTGTATACAA 53946
| | | || || | | | || || | | || ||| | ||| ||||||
Sbjct 969542 CCTCTGTGCTTTGACTGTT--TTCATAGCAAGGCCTTCCTCGGT-GTACTTCTCATACAA 969486
Query 53947 TCGTTCAAACTCGTCTCCCCAAA---CATTGTCCAATCCAGGACATTCATCCGGACACAT 54003
| | || || ||||| | ||||| | ||| | ||| ||| | |
Sbjct 969485 CCTCTTGAAGTCATCTCCATACGTCTCATTG---AGTCCTCTTGCCTGATCAGGAGAGAA 969429
Query 54004 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 54063
| ||| ||| | | ||| | |||| || |||||| |||||||| ||||| | ||
Sbjct 969428 GAGATTCCATTCTTCATTATCTTGCACTTTTTCCATAAACAGATCAGGTATCCACAAGGC 969369
Query 54064 TATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 54122
||| || |||||||| | || ||||||| || || ||||| |||||| ||||
Sbjct 969368 -ATAGAACAGATCTCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCGAAGATCCAGGA 969310
Query 54123 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGT 54182
|| | | | ||||| |||||| |||||||||||||| | | | || |||| || |
Sbjct 969309 ACTCAAAGACATCAGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCTGGCCTCTTAT 969250
Query 54183 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 54242
| || || ||||| | || || || || || ||| | |||||||||||||||| || |
Sbjct 969249 TCCCACCTTGATCCACATACCTGGCTGTATTGTTAAACACTCTCAACATTGGAACTATTC 969190
Query 54243 CATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 54284
||||||| | ||||| || || | ||||||| ||| ||||
Sbjct 969189 CATTGGAAGTGCCATTTGTACCAGCGATATAGGATCC-CTGG 969149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721548049360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |