Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6 205 1e-47 seq3 96.9 4e-15 >seq6 Length=1261692 Score = 205 bits (226), Expect = 1e-47 Identities = 412/607 (68%), Gaps = 13/607 (2%) Strand=Plus/Plus Query 116600 CGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCC 116659 || || ||||| | ||||| || | |||| || || |||| ||| || ||||| Sbjct 57915 CGTCGTTTCGTCCTCTTCCCTATTAAGTACCATGAGATTTGGCAAGCGTATAAGAAGGCT 57974 Query 116660 GAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAG 116719 ||||| || |||||||| | ||||||| | || | || ||||| | ||||||| | Sbjct 57975 GAGGCTTCCTTCTGGACTGCCGAGGAGATTGATTTATCAAAGGATTTGCACGACTGGAAC 58034 Query 116720 CGC---TTGAACGACAACGAGCGCCATTTCATC--AAGCACGTGCTGGCCTTTTTCGCCG 116774 | |||||||| |||||||| |||||| ||| |||||||||||||| |||| Sbjct 58035 AACAGATTGAACGAGAACGAGCGTTTCTTCATCTCAAGA--GTGCTGGCCTTTTTTGCCG 58092 Query 116775 CCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGG 116834 | ||||| |||||||||||||| |||| || ||| || ||||| || | Sbjct 58093 CTTCTGACGGTATCGTCAACGAGAACTTGGTTGAAAACTTCTCTGCAGAGGTTCAAATCC 58152 Query 116835 CCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGT 116894 | ||||| ||||||||| || || |||||| ||||||||| | ||||| || | | Sbjct 58153 CAGAGGCTAAGTGCTTCTATGGGTTCCAGATCATGATGGAGAACATCCACTCTGAGACTT 58212 Query 116895 ATTCGACCCTCATCGACACGTACGT---GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGA 116951 | || | |||||||| ||| | | | | ||||| || || ||||| | Sbjct 58213 ACTCCTTGTTGATCGACACCTACATCAAGGACCCAAAGGAGGCTGAGTTC---TTGTTCA 58269 Query 116952 ACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011 ||||||| || || || || || |||| ||||||| || ||||| || | ||||| | Sbjct 58270 ACGCCATTGAAACCATCCCATGTATCAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTG 58329 Query 117012 CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCT 117071 ||| || ||| || | ||| | || || || || || || || || || ||| Sbjct 58330 CCGATGATGACGCCCTATTTGCAGAGAGACTCGTTGCTTTTGCTGCTGTTGAAGGTATCT 58389 Query 117072 TCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC 117131 |||| || || |||||| |||| |||||| | ||||| | || | ||||| || Sbjct 58390 TCTTCTCCGGTTCATTCGCCTCCATCTTTTGGTTGAAGAAGAGAGGTTTGATGCCAGGTT 58449 Query 117132 TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191 |||| ||| |||||| | || | | | ||||| ||| | || ||| || || |||| Sbjct 58450 TGACCTTCTCTAACGAGTTGATTTGCCGTGACGAAGGTTTACACACCGATTTCGCTTGTT 58509 Query 117192 TGCTGTT 117198 || |||| Sbjct 58510 TGTTGTT 58516 >seq3 Length=2123196 Score = 96.9 bits (106), Expect = 4e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| ||||| ||||| || || || || ||||| ||| | || || || || Sbjct 1815743 AAGATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCC 1815684 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||||||||| ||||| | || Sbjct 1815683 TCCGACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGA 1815625 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| ||| || | |||| || || || || |||| || | | || | ||||| Sbjct 1815624 CCAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTA 1815565 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| |||||| |||| || || Sbjct 1815564 CAACATCCAAAAGGAGTCCACTCTTCA 1815538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219154918320