Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq6 205 1e-47
seq3 96.9 4e-15
>seq6
Length=1261692
Score = 205 bits (226), Expect = 1e-47
Identities = 412/607 (68%), Gaps = 13/607 (2%)
Strand=Plus/Plus
Query 116600 CGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCC 116659
|| || ||||| | ||||| || | |||| || || |||| ||| || |||||
Sbjct 57915 CGTCGTTTCGTCCTCTTCCCTATTAAGTACCATGAGATTTGGCAAGCGTATAAGAAGGCT 57974
Query 116660 GAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAG 116719
||||| || |||||||| | ||||||| | || | || ||||| | ||||||| |
Sbjct 57975 GAGGCTTCCTTCTGGACTGCCGAGGAGATTGATTTATCAAAGGATTTGCACGACTGGAAC 58034
Query 116720 CGC---TTGAACGACAACGAGCGCCATTTCATC--AAGCACGTGCTGGCCTTTTTCGCCG 116774
| |||||||| |||||||| |||||| ||| |||||||||||||| ||||
Sbjct 58035 AACAGATTGAACGAGAACGAGCGTTTCTTCATCTCAAGA--GTGCTGGCCTTTTTTGCCG 58092
Query 116775 CCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGG 116834
| ||||| |||||||||||||| |||| || ||| || ||||| || |
Sbjct 58093 CTTCTGACGGTATCGTCAACGAGAACTTGGTTGAAAACTTCTCTGCAGAGGTTCAAATCC 58152
Query 116835 CCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGT 116894
| ||||| ||||||||| || || |||||| ||||||||| | ||||| || | |
Sbjct 58153 CAGAGGCTAAGTGCTTCTATGGGTTCCAGATCATGATGGAGAACATCCACTCTGAGACTT 58212
Query 116895 ATTCGACCCTCATCGACACGTACGT---GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGA 116951
| || | |||||||| ||| | | | | ||||| || || ||||| |
Sbjct 58213 ACTCCTTGTTGATCGACACCTACATCAAGGACCCAAAGGAGGCTGAGTTC---TTGTTCA 58269
Query 116952 ACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011
||||||| || || || || || |||| ||||||| || ||||| || | ||||| |
Sbjct 58270 ACGCCATTGAAACCATCCCATGTATCAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTG 58329
Query 117012 CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCT 117071
||| || ||| || | ||| | || || || || || || || || || |||
Sbjct 58330 CCGATGATGACGCCCTATTTGCAGAGAGACTCGTTGCTTTTGCTGCTGTTGAAGGTATCT 58389
Query 117072 TCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC 117131
|||| || || |||||| |||| |||||| | ||||| | || | ||||| ||
Sbjct 58390 TCTTCTCCGGTTCATTCGCCTCCATCTTTTGGTTGAAGAAGAGAGGTTTGATGCCAGGTT 58449
Query 117132 TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191
|||| ||| |||||| | || | | | ||||| ||| | || ||| || || ||||
Sbjct 58450 TGACCTTCTCTAACGAGTTGATTTGCCGTGACGAAGGTTTACACACCGATTTCGCTTGTT 58509
Query 117192 TGCTGTT 117198
|| ||||
Sbjct 58510 TGTTGTT 58516
>seq3
Length=2123196
Score = 96.9 bits (106), Expect = 4e-15
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| |||||||| ||||| ||||| || || || || ||||| ||| | || || || ||
Sbjct 1815743 AAGATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCC 1815684
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||||| | | | |||| ||||| || || | ||||||||||| ||||| | ||
Sbjct 1815683 TCCGACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGA 1815625
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||| ||| || | |||| || || || || |||| || | | || | |||||
Sbjct 1815624 CCAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTA 1815565
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892
||||||||| |||||| |||| || ||
Sbjct 1815564 CAACATCCAAAAGGAGTCCACTCTTCA 1815538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219154918320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |