Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq4 93.3 6e-14
seq1 86.0 9e-12
>seq4
Length=1931745
Score = 93.3 bits (102), Expect = 6e-14
Identities = 105/138 (76%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| | ||| | ||||| || | ||| || || ||| || || || || || ||
Sbjct 933736 CCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAGA 933794
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||||||| ||| || |||||||| ||||| ||||||||||||||||| || || ||
Sbjct 933795 CAAGGTTCTGCCATCCTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGG 933854
Query 146170 AATTCCTTCTTTATCTTG 146187
||| || || || || ||
Sbjct 933855 AATACCCTCCTTGTCCTG 933872
>seq1
Length=2451740
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| | ||||| || | ||| || || || || || || || ||
Sbjct 160698 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 160639
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||||| ||| || ||||| || |||||||| ||||||||||| || || || |||
Sbjct 160638 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 160579
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || || || |||||
Sbjct 160578 ATACCCTCCTTGTCTTG 160562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743526334941440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |