Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 6e-14 seq1 86.0 9e-12 >seq4 Length=1931745 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| | ||||| || | ||| || || ||| || || || || || || Sbjct 933736 CCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAGA 933794 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||||| ||| || |||||||| ||||| ||||||||||||||||| || || || Sbjct 933795 CAAGGTTCTGCCATCCTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGG 933854 Query 146170 AATTCCTTCTTTATCTTG 146187 ||| || || || || || Sbjct 933855 AATACCCTCCTTGTCCTG 933872 >seq1 Length=2451740 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| | ||||| || | ||| || || || || || || || || Sbjct 160698 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 160639 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||||| ||| || ||||| || |||||||| ||||||||||| || || || ||| Sbjct 160638 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 160579 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || ||||| Sbjct 160578 ATACCCTCCTTGTCTTG 160562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743526334941440