Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq6 141 9e-29
>seq6
Length=1261692
Score = 141 bits (156), Expect = 9e-29
Identities = 566/879 (64%), Gaps = 23/879 (3%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || ||| |||||||| || ||||| ||||| || || | | || || ||
Sbjct 58798 TTTTGGTAATCAGAGACTCTCTTCTCGAAGAAGTTTGTCTTACCAGCAAGGGAGATGTTC 58739
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063
|||||||| || || || ||| | ||| | || | | | |||| | |||| |
Sbjct 58738 TCCATAAAGTCGAATGGGTTTGTATCGTTGTAGAACTTCTTGT-TACCAAGTGCAACGAG 58680
Query 16064 -AATCTATCCGCCACAAATTCTATA-TACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121
|||||||| || ||| | |||| || || ||| || | ||||||||| || | |
Sbjct 58679 CAATCTATCAGC-ACAGAATCTAACGTATTGACACATCAACTTACAGTTCATACCCAAGA 58621
Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTA 16181
| || | || ||||| || | | | ||| || | || ||||| |||| |
Sbjct 58620 GAGACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATGA 58561
Query 16182 TATCTCTTACTACACTATTTAACGGAGGGTT--TAAT-AAGTGTTTAAACATTATACAAG 16238
| ||||| | ||| | | | | || || | | ||||| ||||| | |||||
Sbjct 58560 T-TCTCTCA--ACAATCTCTGGTGCTGGCTTGTTCTTCAAGTGGGCAAACAACAAACAAG 58504
Query 16239 CAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTG 16298
| ||||| || || |||||||| | | || |||||||| || || || | |||||
Sbjct 58503 CGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTG 58444
Query 16299 GCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATAC 16358
|||| | |||| || || | |||||| || | ||| |||||||| || ||||| ||||
Sbjct 58443 GCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATAC 58384
Query 16359 CTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatcc 16418
||||||| || ||||| ||||| | || ||| | | | | | | ||||
Sbjct 58383 CTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCAATCC 58324
Query 16419 attttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATA 16478
|| | |||||||| || || | || | ||| ||| | || || || || || |
Sbjct 58323 ATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTGAACA 58264
Query 16479 AATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTG 16538
| | | || || || || || || || || | || || | || |
Sbjct 58263 AGAACTCAGCCTCCTTTGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAAGTCTCAG 58204
Query 16539 AATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTA 16598
| || || |||||||| ||||| || ||||| ||||| |||| || | ||||| |
Sbjct 58203 AGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGGGATTTGAA 58144
Query 16599 CTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAA 16658
| || | | || |||| | ||||| ||||| || || || || ||| |||||||
Sbjct 58143 CCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGCGGCAAAAA 58084
Query 16659 ACGCAAGTA----TGTGTTTAATAAA--AtttttttCGTT--ATCTGAAAGTTTTAACCA 16710
| || || | || | | || ||| | || ||||| ||||| || |||
Sbjct 58083 AGGCCAGCACTCTTGAGATGAAGAAACGCTCGTTCTCGTTCAATCTG-----TTGTTCCA 58029
Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTT 16770
||| ||||| ||||||||||| | ||| || ||||||| || ||||| |||||||
Sbjct 58028 GTCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAGCCTT 57969
Query 16771 TTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAA 16809
|||||| || ||| || || | ||| |||||| ||
Sbjct 57968 CTTATACGCTTGCCAAATCTCATGGTACTTAATAGGGAA 57930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511959530200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |