Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 4e-20
seq4 98.7 8e-16
seq1 96.9 3e-15
>seq3
Length=2123196
Score = 113 bits (124), Expect = 4e-20
Identities = 166/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| | |||||||| || ||| |||||| || ||||||||||| |
Sbjct 1815514 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1815573
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | | || |||| ||| || ||||| || ||||| | |||||||| || |
Sbjct 1815574 AAAGTT--CTACCATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTG 1815631
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | |||||| |||||| || || ||| || | | | |||| ||| |
Sbjct 1815632 GGATACCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAA 1815691
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|||||| |||||| ||||| || || || || || || || |||||||| |||
Sbjct 1815692 CCTCCAAGGTAATGGTCTTACCTGTAAGGGTTTTGACGAAAATTTGCATCTTG 1815744
>seq4
Length=1931745
Score = 98.7 bits (108), Expect = 8e-16
Identities = 105/137 (77%), Gaps = 4/137 (3%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| | |||||||| || ||| |||||| |||||||||||||| |
Sbjct 933736 CCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 933795
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | || |||| |||||| || ||||| ||||| | || ||||| || |
Sbjct 933796 AAGGTT--CTGCCATCCTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTG 933853
Query 45228 GCACACCCTCCTTGTCC 45244
| | |||||||||||||
Sbjct 933854 GAATACCCTCCTTGTCC 933870
>seq1
Length=2451740
Score = 96.9 bits (106), Expect = 3e-15
Identities = 155/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| | |||||||| || ||| |||||| || ||||||||||| |
Sbjct 160698 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 160639
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | || |||| ||| || || || || ||||| | |||||||| || |
Sbjct 160638 AAGGTT--CTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 160581
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | |||||||||||| || || ||| || | | | |||| ||| |
Sbjct 160580 GAATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAA 160521
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAG 45328
|||||| |||||| ||||| || |||| ||||| || |||
Sbjct 160520 CCTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAAG 160480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075166295147
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |