Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq6 167 2e-36
>seq6
Length=1261692
Score = 167 bits (184), Expect = 2e-36
Identities = 542/839 (65%), Gaps = 7/839 (1%)
Strand=Plus/Minus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
||||| || ||| ||||| || || |||||||| || ||||| | || || || ||
Sbjct 58798 TTTTGGTAATCAGAGACTCTCTTCTCGAAGAAGTTTGTCTTACCAGCAAGGGAGATGTTC 58739
Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 14032
|||||||| || ||||| ||||| | | | || | ||| ||| | | ||
Sbjct 58738 TCCATAAAGTCGAATGGGTTTGTATCGTTGTAGAACTTCTTGTTACCAAGTGCAACGAGC 58679
Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092
|||||||| ||| ||| || |||||| |||| || | ||| |||||||| | ||
Sbjct 58678 AATCTATCAGCACAGAATCTAACGTATTGACACATCAACTTACAGTTCATACCCAAGAGA 58619
Query 14093 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 14152
| |||| || || || | ||| ||| || ||||| ||| | || ||
Sbjct 58618 GACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATGATT 58559
Query 14153 ATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 14212
|| || ||| || | || | || | || ||| | ||||| || |||
Sbjct 58558 CTCTCAACAATCTCTGGTGCTGGCTTGTTCTTCAAGTGGGCAAACAACAAACAAGCGAAA 58499
Query 14213 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 14272
|| || | || || || | | ||| | ||||| || || || || |||||||||
Sbjct 58498 TCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTGGCATC 58439
Query 14273 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 14332
|| |||| || || |||||||| || | |||||||| ||||| ||||| || || |||
Sbjct 58438 AAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATACCTTCA 58379
Query 14333 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTT 14392
|| |||||||| || | | || ||| |||| || | | | | |||||| |
Sbjct 58378 ACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCAATCCATCTC 58319
Query 14393 CTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGT 14452
|||||| |||| || || || ||| | || |||||||| || || || ||
Sbjct 58318 AAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTGAACAAGAAC 58259
Query 14453 TC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGT 14510
|| | || || || |||| ||||| || || || | ||| || | |||||||
Sbjct 58258 TCAGCCTCCTTTGGGTCCTTG--ATGTAGGTGTCGATCAACAAGGAGTAAGTCTCAGAGT 58201
Query 14511 GTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCT 14570
| ||||| ||||| ||||| || ||||| || || |||| |||| ||| ||||
Sbjct 58200 GGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGGGATTTGAACCT 58141
Query 14571 CTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATG 14630
||| | || |||| |||| || || || || ||||| ||| ||| |||||||| |
Sbjct 58140 CTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGCGGCAAAAAAGG 58081
Query 14631 CCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGT---TTTTTCCAATCGGCTA 14687
||| | || || ||| | |||| | | | | | | || ||||| ||| |
Sbjct 58080 CCAGCACTCTTGAGATGAAGAAACGCTCGTTCTCGTTCAATCTGTTGTTCCAGTCGTGCA 58021
Query 14688 AATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATAC 14746
||||||| || | ||| | || || | ||||| || ||| |||| || ||||||
Sbjct 58020 AATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAGCCTTCTTATAC 57962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345557794760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |