Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq6 167 2e-36 >seq6 Length=1261692 Score = 167 bits (184), Expect = 2e-36 Identities = 542/839 (65%), Gaps = 7/839 (1%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||| ||||| || || |||||||| || ||||| | || || || || Sbjct 58798 TTTTGGTAATCAGAGACTCTCTTCTCGAAGAAGTTTGTCTTACCAGCAAGGGAGATGTTC 58739 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 14032 |||||||| || ||||| ||||| | | | || | ||| ||| | | || Sbjct 58738 TCCATAAAGTCGAATGGGTTTGTATCGTTGTAGAACTTCTTGTTACCAAGTGCAACGAGC 58679 Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092 |||||||| ||| ||| || |||||| |||| || | ||| |||||||| | || Sbjct 58678 AATCTATCAGCACAGAATCTAACGTATTGACACATCAACTTACAGTTCATACCCAAGAGA 58619 Query 14093 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 14152 | |||| || || || | ||| ||| || ||||| ||| | || || Sbjct 58618 GACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATGATT 58559 Query 14153 ATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 14212 || || ||| || | || | || | || ||| | ||||| || ||| Sbjct 58558 CTCTCAACAATCTCTGGTGCTGGCTTGTTCTTCAAGTGGGCAAACAACAAACAAGCGAAA 58499 Query 14213 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 14272 || || | || || || | | ||| | ||||| || || || || ||||||||| Sbjct 58498 TCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTGGCATC 58439 Query 14273 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 14332 || |||| || || |||||||| || | |||||||| ||||| ||||| || || ||| Sbjct 58438 AAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATACCTTCA 58379 Query 14333 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTT 14392 || |||||||| || | | || ||| |||| || | | | | |||||| | Sbjct 58378 ACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCAATCCATCTC 58319 Query 14393 CTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGT 14452 |||||| |||| || || || ||| | || |||||||| || || || || Sbjct 58318 AAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTGAACAAGAAC 58259 Query 14453 TC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGT 14510 || | || || || |||| ||||| || || || | ||| || | ||||||| Sbjct 58258 TCAGCCTCCTTTGGGTCCTTG--ATGTAGGTGTCGATCAACAAGGAGTAAGTCTCAGAGT 58201 Query 14511 GTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCT 14570 | ||||| ||||| ||||| || ||||| || || |||| |||| ||| |||| Sbjct 58200 GGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGGGATTTGAACCT 58141 Query 14571 CTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATG 14630 ||| | || |||| |||| || || || || ||||| ||| ||| |||||||| | Sbjct 58140 CTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGCGGCAAAAAAGG 58081 Query 14631 CCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGT---TTTTTCCAATCGGCTA 14687 ||| | || || ||| | |||| | | | | | | || ||||| ||| | Sbjct 58080 CCAGCACTCTTGAGATGAAGAAACGCTCGTTCTCGTTCAATCTGTTGTTCCAGTCGTGCA 58021 Query 14688 AATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATAC 14746 ||||||| || | ||| | || || | ||||| || ||| |||| || |||||| Sbjct 58020 AATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAGCCTTCTTATAC 57962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345557794760