Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq5 237 1e-57
seq3 87.8 2e-12
>seq5
Length=1517892
Score = 237 bits (262), Expect = 1e-57
Identities = 1179/1857 (63%), Gaps = 50/1857 (3%)
Strand=Plus/Minus
Query 22154 TAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT 22213
|| ||||| || ||||||| ||| ||||||| |||| || || |||||||| | |||
Sbjct 776931 TAGTACATACCGGTCTTCAAGCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTA 776872
Query 22214 CC-ATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCC 22272
|| || | || | || | | || || || ||| || ||||| | || |
Sbjct 776871 CCCATGGTTGGGGCTCTG-ATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGC 776813
Query 22273 TCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAG 22332
|||||||| ||||||| || | || || ||||||||||||||||||||||
Sbjct 776812 ACGATCGGCAGCCATATCAATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAA 776753
Query 22333 TTGCCTGATCTCTAACGGTATCGATTCG-ATCCTCTGGACGGACCCGTTATTGTGTATGA 22391
| | | | | || || | || | | | |||| ||| ||||| | | |||||
Sbjct 776752 GTCCTTCAATTGCTTTGGAAT-GTTTGGCAAGTTTTGGATGGAACCGTTGTCGGATATGA 776694
Query 22392 TCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGAC 22451
| || || || | || | ||| | ||| | | | |||||| | || |
Sbjct 776693 TGTGGTTCTTCATTGCGTCATCCCAGATACCCAAGTCAACCAAATCACGCAGCAAGTATG 776634
Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGA-CGCGGCGTTGGTAAATGTTGGATGTGAAC 22510
||||||| | || || || |||| ||||| | || || ||| || || || ||| |
Sbjct 776633 GGTTCACAATCTGGAATTCACCGG-CAAGAACACGACGAGAGTAGATATTAGAAGTGTAT 776575
Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570
|| || ||| |||| |||| |||| || |||| || || || || ||||| || ||
Sbjct 776574 GGCTCAAAACATTCGTTGTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCA 776515
Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTA-CTCT---TGAGCATCGACCA 22626
| || || |||||||||| || | ||| ||||| | | || | |||| || |||
Sbjct 776514 ACCAAAAGAGAGTTTCTCATACCATACTTGGAAATGTCAGCTTTCAATGAG--TC--CCA 776459
Query 22627 GTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACT 22686
||||||| || | ||| | | |||| | || ||||||| ||| ||
Sbjct 776458 ATCCCACAAGTCAGTTGGCTTACGAC---CCCAGAGGTCAAATTGCAATTGGCCCTGAGA 776402
Query 22687 CGCCGGGCTGCCTTCGTACGTTTCGTACGGACCAT-ATATCGCGGCAAGTTCGCAGCTCG 22745
|| || |||| | | | |||||| | ||| | | | | | ||| | ||| |
Sbjct 776401 AGCTGGAGAGCCTGGGAAGGATTCGTAGGCACCTTCAGCTTGAGCCAACTCAACAGAG-G 776343
Query 22746 CCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGA 22805
|||| | || |||| || ||||| || ||||||| ||||||| || || ||
Sbjct 776342 CCTCGACAGCACCGTGGTAGATAGTTTCAAAGATTTGGATGTTCAACTCTTTAGCAGCAT 776283
Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865
| || | |||||||| | ||||| ||| || ||||| | || || || || |
Sbjct 776282 CAGACTCAAAAGGCATACGTAACATCATGAAGGCATCCGCAAGGCCTTGGACACCAAGGG 776223
Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAAT 22925
| || |||| |||| ||| || || | || || || | || || |||| |
Sbjct 776222 CAATTGGTCTGTTTCTCATGTTAGAAGCACGAGCTTCTGGAACTGGGTAGTAATTTCTGT 776163
Query 22926 CGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGT 22985
|||| ||||||||||||| | || | | || | || | ||||
Sbjct 776162 CGATGATTCTGTTCAAGTTCTTTGTAAGCACCTTGGCAATATCGTGCAACTTTTGGAAGT 776103
Query 22986 CGTAAACGCCCGATTGTA-----CAACAAACTTGT----------TG--ACGGCGATCGA 23028
||| | || | | |||| |||| | || | ||| || ||
Sbjct 776102 TATAA--GTTTGAGTCAAACCATCAACCGACTTCTCAATGAAAGCTGGAAGGGCAATGGA 776045
Query 23029 GGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAG 23088
|| | || || || || ||||||||| || | |||||| ||||| || ||| |
Sbjct 776044 TGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTCACAACACAA 775985
Query 23089 ATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTG--CTTTTTCGATTGCACGAATCC 23146
|| | |||| || | ||||| || |||| ||| |||||| || || | |||
Sbjct 775984 GTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTG--TTACAAGCATCT 775927
Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206
|| || |||||| | || || || || || ||| | ||| | |||||| ||| |
Sbjct 775926 TTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCATACCAGAGC 775867
Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGC 23265
| ||||| | ||| ||| | | | | ||||||| ||||||||| ||||| ||
Sbjct 775866 TTTTGAGCCTTCACA-GTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTGTATACAATGC 775808
Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325
|||||||| |||| || || |||| ||| | | | | ||| | | | | |
Sbjct 775807 TTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGAGAATAAAGT 775748
Query 23326 CCACATTGA--GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAG 23383
||| || | || | |||||| || |||| || ||||| || ||||| | || |
Sbjct 775747 CCA--TTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAAGGCTGGG 775690
Query 23384 AACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCC 23443
|||| || || || | | ||| || || ||| ||||||| | | ||| | || ||
Sbjct 775689 AACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATATCGATGAAATCA 775630
Query 23444 AACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCG 23503
|| | ||||| ||||| ||||| | ||| | |||||| || || |||||||| || ||
Sbjct 775629 AAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCTTGTTACCA 775570
Query 23504 CCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTG 23563
|| || |||||||| | || ||||| || | || | | ||| || | | ||| ||
Sbjct 775569 CCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCAAACCATTA 775510
Query 23564 GACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAA 23623
|| | ||| || || | || ||| | || | ||||||| ||| |||
Sbjct 775509 GAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACTTCTGATATTGTGAATGTGCAAA 775450
Query 23624 CCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCC 23683
|| || || || | | || || |||| || ||||| |||| ||||||||||| ||
Sbjct 775449 CCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGTAGATACCT 775390
Query 23684 TCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTA 23743
|||||| ||| || || | || || | |||||| || ||||| || | | || |||
Sbjct 775389 TCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTGGGCTTGGAGTA 775330
Query 23744 GCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTAC 23803
| || ||||| || || ||||| || ||||| | | ||||| || |||||
Sbjct 775329 CCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCAGGTTGTAA 775270
Query 23804 GTGTCGATGGCGGCATCAATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCAT 23862
|| || || ||| | || || ||| ||||| ||||||||||| || ||||||| ||
Sbjct 775269 GTTTCAATCACGGACTTCATATC-TCTACCGTGGATACCGATGGCCACACGCATCACCAA 775211
Query 23863 GTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922
|| || || | |||| | |||||| | | ||| || || || | | || ||
Sbjct 775210 GTGCTGTGGACGCTCGGCAACTTTGCCGTTCACTCTGAGCAAGTAGGATCTCTCCAATGT 775151
Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
|| || ||||| |||| ||||| ||||| | |||| || ||||| || |||||
Sbjct 775150 CTTGAAACCAAAGTAGTTGTAGTTGAAGTCTCTGTCGTAGACAATGGCAGAGTTCAA 775094
>seq3
Length=2123196
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| || || || ||||| || || || ||| | || ||||| |
Sbjct 1815743 AAGATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAGGTTGAGTCC 1815684
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| | || | ||||| | || |||||| || || | || || |||
Sbjct 1815683 TCCGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGTATCCCACCAGAC 1815624
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || || || || || ||||| || || ||| || || ||
Sbjct 1815623 CAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTAC 1815564
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| || || |||||||| |||| || ||| |||| || |||
Sbjct 1815563 AACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGGT 1815513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766360995440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |