Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq5 293 3e-74
seq4 187 3e-42
>seq5
Length=1517892
Score = 293 bits (324), Expect = 3e-74
Identities = 710/1070 (66%), Gaps = 14/1070 (1%)
Strand=Plus/Minus
Query 63019 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63078
||||||| | || || || | ||||| |||||||||||| ||||| |||||||| |
Sbjct 775976 ACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTTACAAGCATCTTTATAAAGCA 775917
Query 63079 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63138
||||||| |||||||||||| |||| | || | ||||| | ||||| | ||||||
Sbjct 775916 TGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCATACCAGAGCTTTTGAGCCT 775857
Query 63139 TTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGT 63198
| | | | | | | | |||| |||||| ||||||||| ||| || || |
Sbjct 775856 TCACAGTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTGTATACAATGCTTCAAATTCAT 775797
Query 63199 CTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63258
| || | ||| |||| | || | |||| ||| | | || | ||| || ||||
Sbjct 775796 CACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGAGAATAAAGTCCATTCACCGT 775737
Query 63259 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTG 63318
| | || || ||||| || ||||| |||||||| | ||| || | ||| | |
Sbjct 775736 TCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAAGGCTGGGAACAAATCACGAG 775677
Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378
||| || || || || |||||| | | ||||| ||| | | ||||| | |
Sbjct 775676 CTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATATCGATGAAATCAAAGATATCCGCGT 775617
Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438
|||| || |||||||| | ||| | | || || | ||||| || || || || | ||
Sbjct 775616 GCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCTTGTTACCACCTTGGTCGACGT 775557
Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498
|||| || ||||||||| | || | | ||| ||||| | ||| || || |||| ||||
Sbjct 775556 ATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCAAACCATTAGAGGTACCGTTGG 775497
Query 63499 TACCGGAGATATAG---CCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCC 63555
|||| | ||| ||| ||| ||| | ||||| ||| | ||| || || |
Sbjct 775496 TACCAGCGATGTAGGACCCTGTACTT---CTGATATTGTGAATGTGCAAACCGATACCAC 775440
Query 63556 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTAT 63615
| || | |||||||| || || ||| | || || ||||| ||||| ||||| ||| |
Sbjct 775439 CAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGTAGATACCTTCGATGGAGT 775380
Query 63616 CATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAA 63675
| || |||| || || ||||| ||||| || | | | ||| || ||||| |
Sbjct 775379 CTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTGGGCTTGGAGTACCAGCATTGA 775320
Query 63676 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63735
| || || ||||||||||| || || | |||||| | || ||||| || |||||
Sbjct 775319 ACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCAGGTTGTAAGTTTCAATCA 775260
Query 63736 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63795
| || | ||||| | || || || | || |||||||| | || |||||| || |
Sbjct 775259 CGGACTTCATATCTCTACCGTGGATACCGATGGCCACACGCATCACCAAGTGCTGTGGAC 775200
Query 63796 TTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63855
|| ||| |||| ||| | | | | |||||||||| | ||||| || || |||||||
Sbjct 775199 GCTCGGCAACTTTGCCGTTCACTCTGAGCAAGTAGGATCTCTCCAATGTCTTGAAACCAA 775140
Query 63856 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATT 63915
| |||||||| ||||||| ||||| | ||| | || || | || |||||| | |
Sbjct 775139 AGTAGTTGTAGTTGAAGTCTCTGTCGTAGACAATGGCAGAGTTCAACTCATCCTTGAACT 775080
Query 63916 TGTTAACTATATCCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCAT---TTTTA 63971
| || |||| ||| | ||| || | || || | || | || | ||
Sbjct 775079 CTTGGACAATAT-CATAAGTCTCCTTAGACACCATTGGCGCGTG---CAAATTGGTCTTT 775024
Query 63972 GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTG 64031
|| || | ||||||| | || || || ||||| | || ||| | || | |||| ||||
Sbjct 775023 GGGTTGATATAGTTGTACAACTCTTCAATCACAACGCTGAATTGCTTCGTGGTTTGCTTG 774964
Query 64032 TGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081
|| | || || ||||| |||||||| || || | ||||| ||||| ||
Sbjct 774963 TGCAAGTTGGAGATGGCGATTCTGGCAGCAAGCGTAGCATAGTCCGGGTG 774914
Score = 93.3 bits (102), Expect = 5e-14
Identities = 319/489 (65%), Gaps = 15/489 (3%)
Strand=Plus/Minus
Query 62045 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 62104
|||||||||||| | ||| ||||||| || || | | |||||||| || || || |
Sbjct 776971 TGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGTCTTCAA 776912
Query 62105 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT-GGAATAACT-CGGATCTGCT 62162
|| |||| ||||| || ||||| ||| ||||| || | || ||||
Sbjct 776911 GCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTACCCATGGTTGGGGCTCTG-- 776854
Query 62163 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 62222
||||| || |||| ||||||| ||| |||||| | || | | || |||||||| |
Sbjct 776853 ATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCAGCCATATCA 776794
Query 62223 ATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62281
||||| |||||||| | |||||||| | || || || || || | ||| ||| |||
Sbjct 776793 ATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAAGTCCTTCAATTGCTT-TGG 776735
Query 62282 AAGGTTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATC 62338
|| ||||| || || ||||| || || || || ||||| || | ||
Sbjct 776734 AATGTTTGGCAAGTTTTGGATGGAACCGTTGTCGGATATGATGTGGTTCTTCATTGCGTC 776675
Query 62339 ATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAA 62395
|| ||| | | | | || ||| | | || | | ||||| || | |||||
Sbjct 776674 ATCCCAGA---TACCCAAGTCAACCAAATCACGCAGCAAGTATGGGTTCACAATCTGGAA 776618
Query 62396 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATT 62455
||| || | | || | |||| ||| |||||| || || || || | | || ||
Sbjct 776617 TTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTATGGCTCAAAACATTCGTT 776558
Query 62456 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62515
| ||||| ||||||| || || ||||| ||||| ||||| ||||| | | |||||
Sbjct 776557 GTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCT 776498
Query 62516 AAGACCGTA 62524
| ||| ||
Sbjct 776497 CATACCATA 776489
>seq4
Length=1931745
Score = 187 bits (206), Expect = 3e-42
Identities = 753/1170 (64%), Gaps = 45/1170 (4%)
Strand=Plus/Minus
Query 62381 GTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGG 62440
|||||| |||||||| || ||||| | ||| || |||||||| ||||| || ||
Sbjct 970301 GTTAACCACTTGGAACTCGCCAGAGAGTACCCTTCGAGTGTATATATTCGAAGTTATTGG 970242
Query 62441 TTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 62500
|| | ||||||| ||||| || || | || ||||| || ||||| ||| ||||
Sbjct 970241 CTCGAAGCACTCATTGAACCCCAAGATCTGTGAGGTCGATGCTGTAGGCATTGGTCCCAC 970182
Query 62501 CAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCA 62560
||||||| || || || || || | | || | |||||| | ||||||| |
Sbjct 970181 CAATAAAGAGTTCCTTAGTCCATAGCGTTTTATATCATCTTTCATCAAGTCCCAATCGTA 970122
Query 62561 AAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGA 62620
| | ||| || | | |||| | ||| || || || ||
Sbjct 970121 CATGTTCGAAGGGTTATGATTCCACATATCGAATTGCAAAATCCCCTTTGAAGCTGGTGA 970062
Query 62621 TCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTC--GCCTCTAAT 62678
||| |||| | | ||| ||||| | || | ||| || | | | | || || ||
Sbjct 970061 CCCTTCATAACTCTTATAGGGTCCATACTCTTTAGCGAGCT--CTATTGAGGCTTCCAAG 970004
Query 62679 GCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTC--CGGGCTAT 62736
||| ||| ||| || ||||||||||| || |||| | | || || || ||| ||
Sbjct 970003 GCAGCGTGATATATAGTTTCAAAGATGTTGATATTCAACTTTTTAGCGTCTTCGGACT-- 969946
Query 62737 CAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAG 62796
|||| || || ||| || ||| || ||||| ||||| || ||||| | || |
Sbjct 969945 CAAAGGGCAAACGTAACTCCATGAACAGATCTGCTAAACCTTGCACCCCAATTGCCATTG 969886
Query 62797 GTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATT--AATATCTAT 62854
|||||| | || ||| | | | || || | || || ||| || ||| ||
Sbjct 969885 GTCTATTTTTCAAATTGCTGGTCTTTGCCTCCTCCAAGGGGTAC--ATTCCAACATCAAT 969828
Query 62855 AATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT---- 62910
| ||| || | ||| || ||| |||||||| || || | || ||| | |||
Sbjct 969827 GACTTTGTTTAAATTCCTCGTAATCACTTTGACAACCTCGTGGAGCTTGCTATAATTCAT 969768
Query 62911 -----CAAATCGCCCATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACA 62962
|| || || || | ||| | ||| ||| || || || || ||||||||
Sbjct 969767 CCACACAGATTCATCAACTGTCTCAACAAATGACGGCAAAGCCACGGAAGCTAGATTACA 969708
Query 62963 CACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 63022
|| || | || | ||| ||| || | || ||| ||| || || | | ||
Sbjct 969707 AACAGCAATTTCTTCTGCAGAACTATACTGAACAATTTCACAGCATAGGTTTGAAGATTT 969648
Query 63023 GATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 63082
||| ||||| || |||| ||| || ||||| |||||||| || ||||||||||| |||||
Sbjct 969647 GATTGTTCCCAAGTTTTTTTGGTTGCTCTTCTTGTTACAAGCGTCCTTATAAAGCATGAA 969588
Query 63083 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTA 63141
||| ||||||||| | || |||| ||| || ||||||| | ||| | || || |
Sbjct 969587 TGGCCCACCAGTTTCCACTTGGCTCTCTAAAATGGCGTTCCAGA-GCCTCTGTGCTTTGA 969529
Query 63142 TTATAGATTTGTATCT---CCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGT 63198
| | || || | |||| ||| | ||| |||||| | | ||| || |
Sbjct 969528 CTGTT--TTCATAGCAAGGCCTTCCTCGGT-GTACTTCTCATACAACCTCTTGAAGTCAT 969472
Query 63199 CTCCCCAAA---CATTG--TCCAATCTAGGACATTCATCCGGACACATCAACGACCACTC 63253
|||| | ||||| ||| ||| | | ||| ||| | | | ||| ||
Sbjct 969471 CTCCATACGTCTCATTGAGTCC--TCTTGCC---TGATCAGGAGAGAAGAGATTCCATTC 969417
Query 63254 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGAT 63312
| | | ||| | |||| || |||||| |||||||| ||||| | || ||| || ||||
Sbjct 969416 TTCATTATCTTGCACTTTTTCCATAAACAGATCAGGTATCCACAAGGC-ATAGAACAGAT 969358
Query 63313 CTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 63372
|||||| || ||||||| || || ||||| |||||| |||||| | | | ||
Sbjct 969357 CTCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCGAAGATCCAGGAACTCAAAGACAT 969298
Query 63373 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGAT 63432
||| |||||| |||||||||||||| || | | || |||| || || || || ||||
Sbjct 969297 CAGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCTGGCCTCTTATTCCCACCTTGAT 969238
Query 63433 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATAC 63492
| | || || || || || ||| | |||||||||||||||| || || || || | |
Sbjct 969237 CCACATACCTGGCTGTATTGTTAAACACTCTCAACATTGGAACTATTCCATTGGAAGTGC 969178
Query 63493 CATTGGTACCGGAGATATAGCCTCCACTGG 63522
|||| ||||| | ||||||| ||| ||||
Sbjct 969177 CATTTGTACCAGCGATATAGGATCC-CTGG 969149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817544890960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |