Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq6 132 5e-26
seq5 127 2e-24
seq4 111 1e-19
>seq6
Length=1261692
Score = 132 bits (146), Expect = 5e-26
Identities = 570/887 (64%), Gaps = 22/887 (2%)
Strand=Plus/Minus
Query 11338 CTTTTGATATTCACTAACTCGTCGT-TCGAAAAAATTAGTCTTACCTTCTAGTGATATAT 11396
|||||| || ||| |||| || | ||||| || || |||||||| | || || || |
Sbjct 58799 CTTTTGGTAATCAGAGACTC-TCTTCTCGAAGAAGTTTGTCTTACCAGCAAGGGAGATGT 58741
Query 11397 ACTCCATAAAG-CTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTT 11455
|||||||||| | || || || ||| | ||| ||| || | ||| | |
Sbjct 58740 TCTCCATAAAGTCGAATGGGTTTGTAT-CGTTGTAGAACTTCTTGTTACCAAGTGCAACG 58682
Query 11456 AATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATA 11515
| |||||||| || |||| | || ||| |||| || ||| |||||||| |
Sbjct 58681 AGCAATCTATCAGCACAGAATCTAACGTATTGACACATCAACTTACAGTTCATACCCAAG 58622
Query 11516 AGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATT 11575
||| | | |||| |||| |||| || |||| ||| || | || || || ||||
Sbjct 58621 AGAGACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATG 58562
Query 11576 ATCGACGTTATAACTTCCTTAGATGGTGGAT-GTAAT--AAATGTTTAAACATTAAACAC 11632
|| | | || || | || ||| | || | || || ||||| |||||
Sbjct 58561 ATTCTCTCAACAATCTCT---GGTGCTGGCTTGTTCTTCAAGTGGGCAAACAACAAACAA 58505
Query 11633 GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCG 11692
|| ||||| |||||||||||||| | | || | || ||||| || || || ||
Sbjct 58504 GCGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCT 58445
Query 11693 GGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATT 11752
|||||||| |||| || || | |||||| || | || |||||||| || ||||| ||
Sbjct 58444 GGCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATA 58385
Query 11753 CCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTTGTTGCTAGATATC 11809
|| || ||||| ||||| || || | ||| ||| || ||| | | | | |||
Sbjct 58384 CCTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCAATC 58325
Query 11810 CATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAAT 11869
||| | ||||||||||| ||||| || | ||| || ||||| || ||||| ||
Sbjct 58324 CATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTGAAC 58265
Query 11870 AAATGCATTTTTTCTATATT--ATCTCTTACATATGTATCTATTAATAAACTATACATTT 11927
|| | | | || || || | | || || || || || || || | |
Sbjct 58264 AA--GAACTCAGCCTCCTTTGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAAGTCT 58207
Query 11928 CTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACT 11987
| || || || || ||||| || || || |||||||| || ||||||| |
Sbjct 58206 CAGAGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGGGATTT 58147
Query 11988 GTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAA 12047
| || || || | || |||| | || ||||| || || ||||| ||| || ||||
Sbjct 58146 GAACCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGCGGCAA 58087
Query 12048 AAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTT-AAT---TTATCCCAA 12103
|||| || || | | || ||| | |||| | | ||| ||| || | |||
Sbjct 58086 AAAAGGCCAGCACTCTTGAGATGAAGAAACGCTCGT-TCTCGTTCAATCTGTTGTTCCAG 58028
Query 12104 TCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGT 12163
|| | ||||| ||||||||||| | || || | ||||| || ||| | | |
Sbjct 58027 TCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAGCCTTC 57968
Query 12164 TTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAA 12210
|||||| || ||| || ||||| |||||||||||||| | |||||
Sbjct 57967 TTATACGCTTGCCAAATCTCATGGTACTTAATAGGGAAGAGGACGAA 57921
>seq5
Length=1517892
Score = 127 bits (140), Expect = 2e-24
Identities = 473/737 (64%), Gaps = 6/737 (1%)
Strand=Plus/Minus
Query 37780 CCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTT 37839
||||| || | |||||||| ||||| ||||||| ||||||||| || || | || ||
Sbjct 775965 CCCAAGTTCTTCTGATTGGACTTTTTGTTACAAGCATCTTTATAAAGCATGAATGGTGTA 775906
Query 37840 CCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCT 37899
|| ||| | || ||||| | || | | ||| | || || || || || |
Sbjct 775905 CCAGTTTCAGTCTGTGCCTCCAAGATCGCATACCAGAGCTTTTGAGCCTTCACAGTC--T 775848
Query 37900 TTAAtttttttCTTTGTT--TCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATA 37957
|| | ||| | || || ||||| | | |||| ||| | ||| |||| || ||
Sbjct 775847 TTCTTCCTTTACCTTCTTGTTCGTACTTTGTATACAATGCTTCAAATTCATCACCATATG 775788
Query 37958 CATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTA 38017
|||| || || | | || |||| | | || || |||||| | | | ||| |
Sbjct 775787 CATCAGCCAAGCCAGTAGCCTCATTTGGAGAGAATAAAGTCCATTCACCGTTCTGTTCAA 775728
Query 38018 CGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATT 38077
| || | ||| || | ||| || | ||| || || | || ||||| | ||| |
Sbjct 775727 CACGCTTCATGAACAGATCTGGAATCCACAAGGCTGGGAACAAATCACGAGCTCTGATCT 775668
Query 38078 CTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTT 38137
|||| || || |||||||| | | ||||| || ||||| ||||||||||| |
Sbjct 775667 CTTCCTTACCGTGGTTCTTTCTGATATCGATGAAATCAAAGATATCCGCGTGCCATGGCT 775608
Query 38138 CTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTG 38197
| | || | | | ||| |||||||| || | ||| || || | | ||||| | |
Sbjct 775607 CCAAGTACAAGGCAAATGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTATCTTGCAG 775548
Query 38198 TGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATA 38257
|||||||| | | | | |||||| | | ||||||||| | ||||| |||| | |
Sbjct 775547 TGTTATTAAAGACACGGACCATAGGAATCAAACCATTAGAGGTACCGTTGGTACCAGCGA 775488
Query 38258 TATAAGTACCCT-TAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTT 38316
| | || ||||| || || ||||| || ||| || || ||||| || ||
Sbjct 775487 TGT-AGGACCCTGTACTTCTGATATTGTGAATGTGCAAACCGATACCACCAGCGGTCTTA 775429
Query 38317 GATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATT 38376
|| || || || ||||| || || || || | |||||||| || ||| ||||| ||
Sbjct 775428 GAGATCAAGGCACATTGCTTCAAGGTGTCGTAGATACCTTCGATGGAGTCTTCCTTCATA 775369
Query 38377 GGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGA 38436
| | | |||||| ||||| || || |||||| || || || || || || |||
Sbjct 775368 GCAACGAGGAAACAAGAGGACATCTGTGGGCTTGGAGTACCAGCATTGAACAAAGTTGGA 775309
Query 38437 GATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATA 38496
|| || ||| |||| | ||| |||| || || ||||| || || | |||
Sbjct 775308 GAAGCGTGTGTGAAGTAACGTTCAGACATCAGGTTGTAAGTTTCAATCACGGACTTCATA 775249
Query 38497 TCACCGCCGTGAATACC 38513
|| | ||||| |||||
Sbjct 775248 TCTCTACCGTGGATACC 775232
>seq4
Length=1931745
Score = 111 bits (122), Expect = 1e-19
Identities = 385/588 (65%), Gaps = 16/588 (3%)
Strand=Plus/Minus
Query 37703 CTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGAT 37762
|||||||||| ||||||| ||| ||| | |||| | || | ||| || || || |
Sbjct 969717 CTAGATTACAAACAGCAATTTCTTCTGCAGAACTATACTGAACAATTTCACAGCATAGGT 969658
Query 37763 TACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTAT 37822
| ||| | ||||||||||| || |||| ||| || || ||||||| || ||||
Sbjct 969657 TTGAAGATTTGATTGTTCCCAAGTTTTTTTGGTTGCTCTTCTTGTTACAAGCGTCCTTAT 969598
Query 37823 ATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTC 37882
| || || | ||| || ||| | ||| ||| | ||| | ||||| | ||
Sbjct 969597 AAAGCATGAATGGCCCACCAGTTTCCACTTGGCTCTCTAAAATGGCGTTCCAGAGCCTCT 969538
Query 37883 TTGCTTTAAC-GATCGCTTT--AAtttttttCTTTGTTTCGTA-TTCTATATATAATTTG 37938
|||||| || | | | | || || || || ||| |||| ||| || |
Sbjct 969537 GTGCTTTGACTGTTTTCATAGCAAGGCCTTCCTCGGT---GTACTTCTC-ATACAACCTC 969482
Query 37939 TTAAAATCATTCCCCCATACATCGCAT--AATCCTGGA-CATTCGCATGGACACATTAGA 37995
|| || |||| | |||||| || ||| | |||| | | || ||| | | |||
Sbjct 969481 TTGAAGTCAT--CTCCATACGTCTCATTGAGTCCTCTTGCCTGATCA-GGAGAGAAGAGA 969425
Query 37996 GACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA 38055
||||||||||| | || || ||||||||| | |||||||| ||| || |||
Sbjct 969424 TTCCATTCTTCATTATCTTGCACTTTTTCCATAAACAGATCAGGTATCCACAAGGCATAG 969365
Query 38056 AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTT-AGAAAATC 38114
|| | |||| | | || ||| || ||||| ||||| | ||| | || || ||
Sbjct 969364 AACAGATCTCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCG-AAGATCCAGGAACTC 969306
Query 38115 GAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACC 38174
|| | |||||| ||||||||||| | || || | | || ||||| || |||| ||
Sbjct 969305 AAAGACATCAGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCTGGCCTCTTATTCCC 969246
Query 38175 TCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATT 38234
|| |||| | ||| || |||| || ||| | | ||| ||||| || ||||| |||||
Sbjct 969245 ACCTTGATCCACATACCTGGCTGTATTGTTAAACACTCTCAACATTGGAACTATTCCATT 969186
Query 38235 AGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATT 38282
|| |||| ||| |||| | ||||| | |||| || | ||||||
Sbjct 969185 GGAAGTGCCATTTGTACCAGCGATATAGGATCCCTGGGCCCTTATATT 969138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524759004080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |