Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq5 271 1e-67 seq4 167 3e-36 >seq5 Length=1517892 Score = 271 bits (300), Expect = 1e-67 Identities = 646/973 (66%), Gaps = 10/973 (1%) Strand=Plus/Minus Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 |||| ||||||| |||||||| || ||||| | | | | || | | |||||| Sbjct 776052 GCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTCA 775993 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 || | || | |||||||| | || || || | ||||| |||||||||||| Sbjct 775992 CAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTTACAA 775933 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 ||||| |||||||| |||||||| |||||||||||| |||| | || | ||||| | | Sbjct 775932 GCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCATAC 775873 Query 65916 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTAT 65973 |||| | ||||||| | | ||| | || | |||| |||||| ||||| Sbjct 775872 CAGAGCTTTTGAGCCTTCACAGTC--TTTCTTCCTTTACCTTCTTGTTCGTACTTTGTAT 775815 Query 65974 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 66033 ||||| ||| || || || || | ||| |||| |||| | |||| ||| | | Sbjct 775814 ACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGAGA 775755 Query 66034 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 66093 || | ||| || |||| | | || || ||||| || ||||| |||||||| | | Sbjct 775754 ATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAAGG 775695 Query 66094 CTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 66153 || || ||||| | | ||| || || || || |||||| | | ||||| || Sbjct 775694 CTGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATATCGATGA 775635 Query 66154 ACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 66213 | | | ||||| ||||| || |||||||| | ||| | | || || | |||| Sbjct 775634 AATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCTTGT 775575 Query 66214 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 66273 | || || || || | |||||| || ||||||||| | || | | ||| ||||| | || Sbjct 775574 TACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCAAAC 775515 Query 66274 CATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC---ACTTGCACGAATATTACTAA 66330 |||| || ||||| ||||| || | ||| ||| || |||| | ||||| || Sbjct 775514 CATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACTT---CTGATATTGTGAA 775458 Query 66331 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCAT 66390 | | ||| || || || || | |||||||| || || ||| | || || || || | Sbjct 775457 TGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGT 775398 Query 66391 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 66450 |||| || || || || ||| |||| || || ||||| ||||| || | | Sbjct 775397 AGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTGGGC 775338 Query 66451 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTA 66510 ||| || ||||| || || || ||||||||||| || || | |||||| | | Sbjct 775337 TTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCA 775278 Query 66511 GATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 66570 | ||||| || ||||| | || | ||||| | || || || | || ||||||| Sbjct 775277 GGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCACACGCA 775218 Query 66571 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 66630 | | || |||||| || | || | | ||| ||| | | | | |||||||||| | | Sbjct 775217 TCACCAAGTGCTGTGGACGCTCGGCAACTTTGCCGTTCACTCTGAGCAAGTAGGATCTCT 775158 Query 66631 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 66690 |||| || || |||||||| |||||||| ||||||| ||||| | ||| | |||| Sbjct 775157 CCAATGTCTTGAAACCAAAGTAGTTGTAGTTGAAGTCTCTGTCGTAGACAATGGCAGAGT 775098 Query 66691 TGAGTTTATCCTT 66703 | | | |||||| Sbjct 775097 TCAACTCATCCTT 775085 Score = 93.3 bits (102), Expect = 6e-14 Identities = 319/489 (65%), Gaps = 15/489 (3%) Strand=Plus/Minus Query 64838 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 64897 |||||||||||| | ||| ||||||| || || | | |||||||| || || || | Sbjct 776971 TGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGTCTTCAA 776912 Query 64898 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT-GGAATAACT-CGGATCTGCT 64955 || |||| ||||| || ||||| ||| ||||| || | || |||| Sbjct 776911 GCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTACCCATGGTTGGGGCTCTG-- 776854 Query 64956 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 65015 ||||| || |||| ||||||| ||| |||||| | || | | || |||||||| | Sbjct 776853 ATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCAGCCATATCA 776794 Query 65016 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 65074 ||||| |||||||| | |||||||| | || || || || || | ||| ||| ||| Sbjct 776793 ATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAAGTCCTTCAATTGCTT-TGG 776735 Query 65075 AAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATC 65131 || ||||| || || ||||| || || | || || ||||| || | || Sbjct 776734 AATGTTTGGCAAGTTTTGGATGGAACCGTTGTCGGATATGATGTGGTTCTTCATTGCGTC 776675 Query 65132 ATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 65188 || ||| | | | | || ||| | | || | | || || || | || || Sbjct 776674 ATCCCAGA---TACCCAAGTCAACCAAATCACGCAGCAAGTATGGGTTCACAATCTGGAA 776618 Query 65189 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 65248 ||| || | | || | |||| ||| |||||| || || || || | | | || || Sbjct 776617 TTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTATGGCTCAAAACATTCGTT 776558 Query 65249 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 65308 | ||||| ||||||| || || ||||| ||||| ||||| ||||| | | ||||| Sbjct 776557 GTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCT 776498 Query 65309 AAGACCGTA 65317 | ||| || Sbjct 776497 CATACCATA 776489 >seq4 Length=1931745 Score = 167 bits (184), Expect = 3e-36 Identities = 392/582 (67%), Gaps = 16/582 (3%) Strand=Plus/Minus Query 65732 CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 65791 ||| || || || || ||||||||||| || | || | ||| ||| || | || Sbjct 969731 CAAAGCCACGGAAGCTAGATTACAAACAGCAATTTCTTCTGCAGAACTATACTGAACAAT 969672 Query 65792 CTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 65851 ||| ||| || || | | ||||| ||||| || |||| ||| || ||||| ||||| Sbjct 969671 TTCACAGCATAGGTTTGAAGATTTGATTGTTCCCAAGTTTTTTTGGTTGCTCTTCTTGTT 969612 Query 65852 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 65911 ||| || ||||||||||| |||||||| ||||||||| | || |||| ||| || Sbjct 969611 ACAAGCGTCCTTATAAAGCATGAATGGCCCACCAGTTTCCACTTGGCTCTCTAAAATGGC 969552 Query 65912 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCT---CTTTTCTCTTTCGTATA 65967 ||||||| | ||| | || || | | | || || | | || ||| | ||| Sbjct 969551 GTTCCAGA-GCCTCTGTGCTTTGACTGTT--TTCATAGCAAGGCCTTCCTCGGT-GTACT 969496 Query 65968 GTGTATACAATCGTTCGAACTCGTCTCCCCAAA---CATTGTCCAATCCAGGACATTCAT 66024 |||||| | | ||| || ||||| | ||||| | ||| | || Sbjct 969495 TCTCATACAACCTCTTGAAGTCATCTCCATACGTCTCATTG---AGTCCTCTTGCCTGAT 969439 Query 66025 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 66084 | ||| | | | ||| ||| | | ||| | |||| || |||||| |||||||| | Sbjct 969438 CAGGAGAGAAGAGATTCCATTCTTCATTATCTTGCACTTTTTCCATAAACAGATCAGGTA 969379 Query 66085 TCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 66143 |||| | || ||| || | |||||| | || ||||||| || || ||||| | Sbjct 969378 TCCACAAGGC-ATAGAACAGATCTCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCGA 969320 Query 66144 AGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 66203 ||||| |||||| | | | |||| |||||| |||||||||||||| || | | || Sbjct 969319 AGATCCAGGAACTCAAAGACATCAGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCT 969260 Query 66204 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 66263 |||| || || || || ||||| | || || || || || ||| | |||||||||||| Sbjct 969259 GGCCTCTTATTCCCACCTTGATCCACATACCTGGCTGTATTGTTAAACACTCTCAACATT 969200 Query 66264 GGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 66305 |||| || |||||||| || ||||| || || | ||||||| Sbjct 969199 GGAACTATTCCATTGGAAGTGCCATTTGTACCAGCGATATAG 969158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172742409880