Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq6 116 3e-21 >seq6 Length=1261692 Score = 116 bits (128), Expect = 3e-21 Identities = 280/420 (67%), Gaps = 8/420 (2%) Strand=Plus/Plus Query 22744 CTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTC 22803 ||| | || ||||| ||||||||||| || | || || || ||||| || |||| || Sbjct 58359 CTCGTTGCTTTTGCTGCTGTTGAAGGTATCTTCTTCTCCGGTTCATTCGCCTCCATCTTT 58418 Query 22804 TGGCTGAAGAA---ACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 ||| ||||||| | ||| | |||||||| ||| | || || |||||||||||| || Sbjct 58419 TGGTTGAAGAAGAGAGGTT---TGATGCCAGGTTTGACCTTCTCTAACGAGTTGATTTGC 58475 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920 |||||||||||| ||||| || || |||||| || ||||| || || ||||| Sbjct 58476 CGTGACGAAGGTTTACACACCGATTTCGCTTGTTTGTTGTTTGCCCACTTGAAGAACAAG 58535 Query 22921 CCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTC 22980 || | || || | |||||| | || || || || ||||| | | | | Sbjct 58536 CCAGCACCAGAGATTGTTGAGAGAATCATCACCGAAGCTGTCGAGATTGAATCAGAGTAC 58595 Query 22981 TTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTAC 23040 || ||| || || | | || | |||||||| || | ||| | | ||| Sbjct 58596 TTTACAGATGCTCTTCCAGCGTCTCTCTTGGGTATGAACTGTAAGTTGATGTGTCAATAC 58655 Query 23041 -ATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGT 23099 || | | || ||| ||| | |||||| ||| || ||| | ||| | || |||| Sbjct 58656 GTTAGATTCTG-TGCTGATAGATTGCTCGTTGCACTTGGTAACAAGAAGTTCTACAACGA 58714 Query 23100 TGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159 | | || ||||| || || ||||| ||||| | ||| ||||| ||||||||||| || Sbjct 58715 TACAAACCCATTCGACTTTATGGAGAACATCTCCCTTGCTGGTAAGACAAACTTCTTCGA 58774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233569608821