Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 302 6e-77 seq4 206 4e-48 >seq5 Length=1517892 Score = 302 bits (334), Expect = 6e-77 Identities = 1216/1902 (64%), Gaps = 51/1902 (3%) Strand=Plus/Minus Query 78717 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 78776 |||||||||||| | ||| ||||||| || || | | |||||||| || || || | Sbjct 776971 TGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGTCTTCAA 776912 Query 78777 ACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGA-TCTGCT 78834 || |||| |||||||| ||||| ||| ||||| || | || |||| Sbjct 776911 GCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTACCCATGGTTGGGGCTCTG-- 776854 Query 78835 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 78894 ||||| || |||| ||||||| ||| |||||| | || | | || |||||||| | Sbjct 776853 ATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCAGCCATATCA 776794 Query 78895 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 78953 ||||| |||||||| | |||||||| | || || || || || | ||| ||| ||| Sbjct 776793 ATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAAGTCCTTCAATTGCTT-TGG 776735 Query 78954 AAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTC 79010 || ||||| || || ||||| || || | || || ||||| || | || Sbjct 776734 AATGTTTGGCAAGTTTTGGATGGAACCGTTGTCGGATATGATGTGGTTCTTCATTGCGTC 776675 Query 79011 ATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 79067 || ||| | | | | || ||| | | || | | || || || | || || Sbjct 776674 ATCCCAGA---TACCCAAGTCAACCAAATCACGCAGCAAGTATGGGTTCACAATCTGGAA 776618 Query 79068 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATT 79127 ||| || | | || | |||| ||| |||||| || ||||| || | |||| || Sbjct 776617 TTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTATGGCTCAAAACATTCGTT 776558 Query 79128 ATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCT 79187 | ||||| ||||||| || || || |||||||| ||||| ||||| | | ||||| Sbjct 776557 GTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCT 776498 Query 79188 AAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGAC 79247 | ||| || || | | |||| | || ||||||||||| | |||| || Sbjct 776497 CATACCATACTTGGAAATGTCAGCTTTCAATGAGTCCCAATCCCACAAGTCAGTTGGCTT 776438 Query 79248 AACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTC 79307 | | ||| || ||| |||| | || | | ||| || |||| | | | ||| Sbjct 776437 ACGACCCCAGAGGTCAAATTGCAATTGGCCCTGAGAAGCTGGAGAGCCTGGGAAGGATTC 776378 Query 79308 ATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGT 79367 || | ||||| || || || ||| | ||||| | || |||| || || || Sbjct 776377 GTAGGCACCTTCAGCTTGAGCCAACTCAACAGAGGCCTCGACAGCACCGTGGTAGATAGT 776318 Query 79368 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCT--AGGCTATCAAATGGATAATTTAAG 79425 ||| || || | | || | |||| || | || || |||| || | ||| Sbjct 776317 TTCAAAGATTTGGATGTTCAACTCTTTAGCAGCATCAGACT--CAAAAGGCATACGTAAC 776260 Query 79426 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 79485 | || || || || || | ||||| ||||||| | || ||||| | |||| | ||| Sbjct 776259 ATCATGAAGGCATCCGCAAGGCCTTGGACACCAAGGGCAATTGGTCTGTTTCTCATGTTA 776200 Query 79486 GAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTG 79545 ||| ||||||||||| || || ||||| | || || ||| | || | ||| | Sbjct 776199 GAAGCACGAGCTTCTGGAACTGGGTAGTAATTTCTGTCGATGATTCTGTTCAAGTTCTTT 776140 Query 79546 ACTATTACTTTGACCACATC------CTTT-----------AGTTTGAGAAAATCAAATC 79588 | || ||| | | ||| |||| |||||||| ||||| | Sbjct 776139 GTAAGCACCTTGGCAATATCGTGCAACTTTTGGAAGTTATAAGTTTGAG----TCAAACC 776084 Query 79589 GTCCATCTATTAC--AA--ACATGTTCAACG-CGACAGATGCCAGATTACAAACGGCTAC 79643 || | | | | | || | | | || | | | ||||||| |||||||| || || Sbjct 776083 ATCAACCGACTTCTCAATGAAAGCTGGAAGGGCAATGGATGCCAAGTTACAAACAGCAAC 776024 Query 79644 CTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCC 79703 ||| | | | | || | | || ||| || | ||| | |||| ||| | || Sbjct 776023 CTCGTCTGGAGAAGAGTACTCGACAATCTCACAACACAAGTTCGAAGACTTGATGATACC 775964 Query 79704 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACC 79763 || || | ||||| |||||||||||| ||||| |||||||| ||||| || ||||| Sbjct 775963 CAAGTTCTTCTGATTGGACTTTTTGTTACAAGCATCTTTATAAAGCATGAATGGTGTACC 775904 Query 79764 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTT 79823 ||||||| |||| | || | ||||| | ||||| | ||||||| | || ||| Sbjct 775903 AGTTTCAGTCTGTGCCTCCAAGATCGCATACCAGAGCTTTTGAGCCTTCAC---AGTCTT 775847 Query 79824 GTATCTCTT---TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAAC 79880 || || |||| |||||| | |||||| ||| ||| || || || || | | Sbjct 775846 TCTTCCTTTACCTTCTTGTTCGTACTTTGTATACAATGCTTCAAATTCATCACCATATGC 775787 Query 79881 ATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTAC 79940 ||| | || |||| | || | ||| | | || | ||| || || | | | || Sbjct 775786 ATCAGCCAAGCCAGTAGCCTCATTTGGAGAGAATAAAGTCCATTCACCGTTCTGTTCAAC 775727 Query 79941 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTC 80000 || ||||| || ||||| |||||||| | ||| || | ||| | | ||| ||| Sbjct 775726 ACGCTTCATGAACAGATCTGGAATCCACAAGGCTGGGAACAAATCACGAGCTCTGATCTC 775667 Query 80001 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 80060 || || || |||||| | | ||||| ||| | | ||||| | ||||| || || Sbjct 775666 TTCCTTACCGTGGTTCTTTCTGATATCGATGAAATCAAAGATATCCGCGTGCCATGGCTC 775607 Query 80061 CAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 80120 |||||| | ||| | | || |||| ||||| || || || || | |||||| || || Sbjct 775606 CAAGTACAAGGCAAATGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTATCTTGCAGT 775547 Query 80121 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGAT 80180 ||||||| | || | | ||| ||||| | |||||| || ||||| ||||| || | ||| Sbjct 775546 GTTATTAAAGACACGGACCATAGGAATCAAACCATTAGAGGTACCGTTGGTACCAGCGAT 775487 Query 80181 ATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 80240 ||| || | | ||||| ||| | ||| || || || || | ||||| Sbjct 775486 GTAGGACCCTGTACTTCTGATATTGTGAATGTGCAAACCGATACCACCAGCGGTCTTAGA 775427 Query 80241 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTT 80300 ||| || || ||| | || || || || ||||| || || ||| || || |||| Sbjct 775426 GATCAAGGCACATTGCTTCAAGGTGTCGTAGATACCTTCGATGGAGTCTTCCTTCATAGC 775367 Query 80301 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 80360 || || ||||| ||||| || | | ||| || ||||| || || || ||||| Sbjct 775366 AACGAGGAAACAAGAGGACATCTGTGGGCTTGGAGTACCAGCATTGAACAAAGTTGGAGA 775307 Query 80361 AGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC 80420 |||||| || || | |||||||| || ||||| || ||||| | || | ||||| Sbjct 775306 AGCGTGTGTGAAGTAACGTTCAGACATCAGGTTGTAAGTTTCAATCACGGACTTCATATC 775247 Query 80421 CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 80480 | || || || | || |||||||| | || |||||| || | || | | || Sbjct 775246 TCTACCGTGGATACCGATGGCCACACGCATCACCAAGTGCTGTGGACGCTCGGCAACTTT 775187 Query 80481 GTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 80540 | || | | | | |||||| ||| | ||||| || || |||||||| |||||||| Sbjct 775186 GCCGTTCACTCTGAGCAAGTAGGATCTCTCCAATGTCTTGAAACCAAAGTAGTTGTAGTT 775127 Query 80541 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582 ||||||| ||||| | ||| | ||||| | | |||||| Sbjct 775126 GAAGTCTCTGTCGTAGACAATGGCAGAGTTCAACTCATCCTT 775085 >seq4 Length=1931745 Score = 206 bits (228), Expect = 4e-48 Identities = 751/1163 (65%), Gaps = 33/1163 (3%) Strand=Plus/Minus Query 79054 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGT 79113 ||||| ||||| || || ||||| | ||| || |||||||| ||||| || ||| Sbjct 970300 TTAACCACTTGGAACTCGCCAGAGAGTACCCTTCGAGTGTATATATTCGAAGTTATTGGC 970241 Query 79114 TCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACC 79173 || | | ||||| ||||| || || | || ||||| || ||||| ||| ||||| Sbjct 970240 TCGAAGCACTCATTGAACCCCAAGATCTGTGAGGTCGATGCTGTAGGCATTGGTCCCACC 970181 Query 79174 AATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAA 79233 |||||| || || || || || | | || | |||||| | | |||||||| | Sbjct 970180 AATAAAGAGTTCCTTAGTCCATAGCGTTTTATATCATCTTTCATCAAGTCCCAATCGTAC 970121 Query 79234 AGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGAT 79293 | | || ||| | |||||| | ||| |||| | ||| || || ||| ||| Sbjct 970120 ATGTTCGAAGGGTTATGATTCCACATATCGAATTGCAAAATCCCCTTTGAAGCTGGTGAC 970061 Query 79294 CCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCT 79353 ||| || | | ||| ||||| | || || || | || || || || || Sbjct 970060 CCTTCATAACTCTTATAGGGTCCATACTCTTTAGCGAGCTCTATTGAGGCTTCCAAGGCA 970001 Query 79354 CCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAAT 79413 ||| ||| || ||||| || || || |||| | | || || ||| | ||||| Sbjct 970000 GCGTGATATATAGTTTCAAAGATGTTGATATTCAACTTTTTAGCGTCTTCGGACTCAAAG 969941 Query 79414 GGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 79473 || || ||| || ||| |||||||| ||||| || ||||| | || |||||| Sbjct 969940 GGCAAACGTAACTCCATGAACAGATCTGCTAAACCTTGCACCCCAATTGCCATTGGTCTA 969881 Query 79474 TGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATT--AATATCTATAATTT 79531 | | || ||| | | || || | || || ||| || ||| || | || Sbjct 969880 TTTTTCAAATTGCTGGTCTTTGCCTCCTCCAAGGGGTAC--ATTCCAACATCAATGACTT 969823 Query 79532 TATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAAT--------- 79582 | || | |||||| || |||||||| || || | || ||| | ||| Sbjct 969822 TGTTTAAATTCCTCGTAATCACTTTGACAACCTCGTGGAGCTTGCTATAATTCATCCACA 969763 Query 79583 CAAATCGTCCATCTATTACAA-ACATGTT--CAACGCGACAGATGCCAGATTACAAACGG 79639 || || || || | ||| | ||| ||| || || || || ||||||||||| | Sbjct 969762 CAGATTCATCAACTGTCTCAACAAATGACGGCAAAGCCACGGAAGCTAGATTACAAACAG 969703 Query 79640 CTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGG 79699 | | || | ||| ||| || | |||||| ||| ||||| | | || || | Sbjct 969702 CAATTTCTTCTGCAGAACTATACTGAACAATTTCACAGCATAGGTTTGAAGATTTGATTG 969643 Query 79700 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAG 79759 |||| || |||| ||| || ||||| |||||||| || ||||||||||| ||||| || Sbjct 969642 TTCCCAAGTTTTTTTGGTTGCTCTTCTTGTTACAAGCGTCCTTATAAAGCATGAATGGCC 969583 Query 79760 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATA 79818 ||||||||| | || |||| ||| || ||||||| | ||| | || || | | | Sbjct 969582 CACCAGTTTCCACTTGGCTCTCTAAAATGGCGTTCCAGA-GCCTCTGTGCTTTGACTGTT 969524 Query 79819 GACTT-GTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCA 79877 | | | | | || ||| | ||| | ||| || | | ||| || ||||| | Sbjct 969523 TTCATAGCAAGGCCTTCCTCGGT-GTACTTCTCATACAACCTCTTGAAGTCATCTCCATA 969465 Query 79878 AACATCGTCTAATCCAGGACATTCG-----TCAGGACACATCAACGACCACTCTCCATCA 79932 ||||| || || | | | |||||| | | | ||| ||| ||| | Sbjct 969464 -----CGTCTCATTGAGTCCTCTTGCCTGATCAGGAGAGAAGAGATTCCATTCTTCATTA 969410 Query 79933 TCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGT 79991 || | ||| || |||||| |||||||| ||||| | || ||| || |||||||| | Sbjct 969409 TCTTGCACTTTTTCCATAAACAGATCAGGTATCCACAAGGC-ATAGAACAGATCTCTTGC 969351 Query 79992 TCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 80051 || | ||||| || || ||||| |||||| |||||| | | | ||||| ||| Sbjct 969350 TCGCAGTTCCTCCTTCCCATGGTTCTTCCGAAGATCCAGGAACTCAAAGACATCAGCATG 969291 Query 80052 CCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTA 80111 ||| |||||||||||||| || | | || || | || || || || ||||| | || Sbjct 969290 CCATGGTTCCAAGTATATTGCAAAGGCCCCTGGCCTCTTATTCCCACCTTGATCCACATA 969231 Query 80112 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGT 80171 || || || || ||| | |||||||||||||||| || |||||||| || ||||| || Sbjct 969230 CCTGGCTGTATTGTTAAACACTCTCAACATTGGAACTATTCCATTGGAAGTGCCATTTGT 969171 Query 80172 CCCGGAGATATAGCTTCCACTGG 80194 || | ||||||| ||| |||| Sbjct 969170 ACCAGCGATATAGGATCC-CTGG 969149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268737151480