Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq6 159 3e-34
>seq6
Length=1261692
Score = 159 bits (176), Expect = 3e-34
Identities = 546/842 (65%), Gaps = 13/842 (2%)
Strand=Plus/Minus
Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640
||||| || ||| ||||| || || |||||||| || ||||| | || || || ||
Sbjct 58798 TTTTGGTAATCAGAGACTCTCTTCTCGAAGAAGTTTGTCTTACCAGCAAGGGAGATGTTC 58739
Query 13641 TCCATAAAATCAAATGGATTT--ATTGACATAAACACTTTATCACAACCTAGTTCTAATA 13698
|||||||| || ||||| ||| || | || | |||| | | || ||| | | |
Sbjct 58738 TCCATAAAGTCGAATGGGTTTGTATCGTTGTAGA-ACTTCTTGTTA-CCAAGTGCAACGA 58681
Query 13699 GTAATCTATCAGCA-ATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 13757
| |||||||||||| | || || || |||||| |||| || | ||| |||||||| |
Sbjct 58680 GCAATCTATCAGCACAGAATCT-AACGTATTGACACATCAACTTACAGTTCATACCCAAG 58622
Query 13758 AGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATA 13817
|| | |||| || || || | ||| ||| || ||||| || | ||
Sbjct 58621 AGAGACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATG 58562
Query 13818 ATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 13877
|| | || |||||| | || | || | || ||| | ||||| ||
Sbjct 58561 ATTCTCTCAACAATCTCTGGTGCTGGCTTGTTCTTCAAGTGGGCAAACAACAAACAAGCG 58502
Query 13878 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13937
||||| || | || || || | | ||| | ||||| || || || || ||||||
Sbjct 58501 AAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTGGC 58442
Query 13938 ATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCC 13997
||||| |||| || || |||||||| || | || ||||| ||||| ||||| || ||
Sbjct 58441 ATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATACCT 58382
Query 13998 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCAT 14057
||||| |||||||| || | | || ||| |||| || | | | | ||||||
Sbjct 58381 TCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCAATCCAT 58322
Query 14058 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14117
| |||||| |||| || || || ||| | || |||||||| || || || ||
Sbjct 58321 CTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTGAACAAG 58262
Query 14118 TATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14175
| || | || || || |||| ||||| || || || | ||| || | ||||
Sbjct 58261 AACTCAGCCTCCTTTGGGTCCTTG--ATGTAGGTGTCGATCAACAAGGAGTAAGTCTCAG 58204
Query 14176 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTA 14235
|||| ||||| ||||| ||||| || ||||| ||||| |||| || | ||| |
Sbjct 58203 AGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGGGATTTGAA 58144
Query 14236 CTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14295
| || | | || |||| |||| || || || || ||||| ||| ||| |||||||
Sbjct 58143 CCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGCGGCAAAAA 58084
Query 14296 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGG 14352
| |||| | || || ||| | |||| | | ||| | | || ||||| |||
Sbjct 58083 AGGCCAGCACTCTTGAGATGAAGAAACGCTCGTTCTCGTTCAATCTGTTGTTCCAGTCGT 58024
Query 14353 ATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTAT 14412
|||||||| || | ||| | || || | ||||| || ||| |||| || ||||
Sbjct 58023 GCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAGCCTTCTTAT 57964
Query 14413 AC 14414
||
Sbjct 57963 AC 57962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727958023800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |