Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq6 176 4e-39
>seq6
Length=1261692
Score = 176 bits (194), Expect = 4e-39
Identities = 546/840 (65%), Gaps = 9/840 (1%)
Strand=Plus/Minus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
||||| || ||| ||||| || || || ||||| || ||||| | || || || ||
Sbjct 58798 TTTTGGTAATCAGAGACTCTCTTCTCGAAGAAGTTTGTCTTACCAGCAAGGGAGATGTTC 58739
Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488
|||||||| |||||||| ||||| | | | || | ||| ||| | | |
Sbjct 58738 TCCATAAAGTCGAATGGGTTTGTATCGTTGTAGAACTTCTTGTTACCAAGTGCAACGAGC 58679
Query 13489 AATCTATCAGCA-ATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547
|||||||||||| | || || || |||||| |||| || | ||| |||||||| | ||
Sbjct 58678 AATCTATCAGCACAGAATCT-AACGTATTGACACATCAACTTACAGTTCATACCCAAGAG 58620
Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607
| |||| || || || | ||| ||| || ||||| ||| | || ||
Sbjct 58619 AGACGCTGGAAGAGCATCTGTAAAGTACTCTGATTCAATCTCGACAGCTTCGGTGATGAT 58560
Query 13608 AATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13667
||| || ||| || | || | || | || ||| | ||||| || ||
Sbjct 58559 TCTCTCAACAATCTCTGGTGCTGGCTTGTTCTTCAAGTGGGCAAACAACAAACAAGCGAA 58500
Query 13668 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13727
||| || | || || || | | ||| | ||||| || || || || ||||||||
Sbjct 58499 ATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGAGAAGGTCAAACCTGGCAT 58440
Query 13728 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 13787
||| |||| || || |||||||| || | |||||||| ||||| ||||| || || ||
Sbjct 58439 CAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACCGGAGAAGAAGATACCTTC 58380
Query 13788 AACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTT 13847
||| |||||||| || | |||| ||| |||| || | | | | |||||| |
Sbjct 58379 AACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTCATCATCGGCAATCCATCT 58320
Query 13848 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATG 13907
|||||| |||| || || || ||| | || ||||| || || ||||| ||
Sbjct 58319 CAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTCAATGGCGTTGAACAAGAA 58260
Query 13908 TTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAG 13965
|| | || || || |||| ||||| || || || | ||| || | ||||||
Sbjct 58259 CTCAGCCTCCTTTGGGTCCTTG--ATGTAGGTGTCGATCAACAAGGAGTAAGTCTCAGAG 58202
Query 13966 TGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14025
|| ||||| || || ||||| || ||||| || || |||| |||| ||| |||
Sbjct 58201 TGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAGCCTCTGGGATTTGAACC 58142
Query 14026 TCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAAT 14085
|| | | || |||| ||||||| || || || ||||| ||| ||| ||||||||
Sbjct 58141 TCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGTCAGAAGCGGCAAAAAAG 58082
Query 14086 GCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGCT 14142
|||| | || || ||| | |||| | | ||| | | || ||||| |||
Sbjct 58081 GCCAGCACTCTTGAGATGAAGAAACGCTCGTTCTCGTTCAATCTGTTGTTCCAGTCGTGC 58022
Query 14143 AAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATAC 14202
|||||||| || | ||| | || || | ||||| || ||| |||| || ||||||
Sbjct 58021 AAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAGCCTTCTTATAC 57962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588758123480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |