Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5 269 4e-67 seq4 185 1e-41 >seq5 Length=1517892 Score = 269 bits (298), Expect = 4e-67 Identities = 751/1147 (65%), Gaps = 14/1147 (1%) Strand=Plus/Minus Query 71697 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTC 71756 ||||| ||||||| |||||||| || ||||| | | | | || | | ||| || Sbjct 776053 GGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTC 775994 Query 71757 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 71816 | || | || | |||||||| | || || || | ||||| |||||||||||| Sbjct 775993 ACAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTTACA 775934 Query 71817 CGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 71876 ||||| |||||||| || || || |||||||||||| |||| | || | ||||| | Sbjct 775933 AGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCATA 775874 Query 71877 CCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT---TTCTCTTTCGTATTGTGT 71933 ||||| | ||||||| | | |||| || || |||| |||||| | ||| Sbjct 775873 CCAGAGCTTTTGAGCCTTCAC---AGTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTGT 775817 Query 71934 ATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACA 71993 ||| ||| ||| || || || || | |||| | || |||| | ||||| ||| | Sbjct 775816 ATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGA 775757 Query 71994 CATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 72053 | || | ||| || || | | | || || ||||| || ||||| |||||||| | Sbjct 775756 GAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAA 775697 Query 72054 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 72113 ||| || | ||| | | ||| ||| || || || |||||| | | ||||| Sbjct 775696 GGCTGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATATCGAT 775637 Query 72114 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTT 72173 ||| | | ||||| | ||||| || |||||||| | ||| | | || || | || Sbjct 775636 GAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCTT 775577 Query 72174 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 72233 ||| || || || || | |||||| || ||||||||| | || | | ||| ||||| | Sbjct 775576 GTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCAA 775517 Query 72234 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAAT 72293 |||||| || | ||| ||||| || | ||| ||| || | | |||||| ||| Sbjct 775516 ACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACTTCTGATATTGTGAAT 775457 Query 72294 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 72353 | ||| || || || || | |||||||| || || ||| | || || || || || Sbjct 775456 GTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGTA 775397 Query 72354 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 72413 ||| || || || || ||| |||| || || ||||| ||||| || | | Sbjct 775396 GATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTGGGCT 775337 Query 72414 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAG 72473 ||| || ||||| || || || ||||||||||| || || | |||||||| || Sbjct 775336 TGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCAG 775277 Query 72474 ATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCAT 72533 ||||| || ||||| | || | ||||| | || || || | || |||||||| Sbjct 775276 GTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCACACGCAT 775217 Query 72534 TAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTC 72593 | || ||||| || | || | | ||| || | | | | |||||||||| | || Sbjct 775216 CACCAAGTGCTGTGGACGCTCGGCAACTTTGCCGTTCACTCTGAGCAAGTAGGATCTCTC 775157 Query 72594 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 72653 ||| || || |||||||| |||||||| ||||||| ||||| | ||| | || || Sbjct 775156 CAATGTCTTGAAACCAAAGTAGTTGTAGTTGAAGTCTCTGTCGTAGACAATGGCAGAGTT 775097 Query 72654 GAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAAT 72712 | | |||||| | | | || |||| ||| | ||| || | || || | | Sbjct 775096 CAACTCATCCTTGAACTCTTGGACAATAT-CATAAGTCTCCTTAGACACCATTGGCGCGT 775038 Query 72713 GTTTCCCAT---TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 72769 | | || | || || || | ||||||| | || || || ||||| | || ||| Sbjct 775037 G---CAAATTGGTCTTTGGGTTGATATAGTTGTACAACTCTTCAATCACAACGCTGAATT 774981 Query 72770 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAAT 72829 | || | |||| |||||| | || || | ||| |||||||| || || | ||||| | Sbjct 774980 GCTTCGTGGTTTGCTTGTGCAAGTTGGAGATGGCGATTCTGGCAGCAAGCGTAGCATAGT 774921 Query 72830 CTGGATG 72836 | || || Sbjct 774920 CCGGGTG 774914 >seq4 Length=1931745 Score = 185 bits (204), Expect = 1e-41 Identities = 612/936 (65%), Gaps = 18/936 (2%) Strand=Plus/Minus Query 71694 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAAT 71753 ||| || || || || ||||||||||| || | || | ||| ||| || | ||| Sbjct 969731 CAAAGCCACGGAAGCTAGATTACAAACAGCAATTTCTTCTGCAGAACTATACTGAACAAT 969672 Query 71754 TTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 71813 |||| ||| || || | | ||||| ||||| || |||| ||| || ||||| ||||| Sbjct 969671 TTCACAGCATAGGTTTGAAGATTTGATTGTTCCCAAGTTTTTTTGGTTGCTCTTCTTGTT 969612 Query 71814 ACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 71873 ||| || ||||||||||| || || || ||||||||| | || |||| ||| || Sbjct 969611 ACAAGCGTCCTTATAAAGCATGAATGGCCCACCAGTTTCCACTTGGCTCTCTAAAATGGC 969552 Query 71874 TTTCCAGACGACTC-GAGCCTTTATTATATTCTT-GTATCTCTTTTCTCTTTCGTATTGT 71931 ||||||| | ||| | || || | | | ||| | | | | || ||| | ||| | Sbjct 969551 GTTCCAGA-GCCTCTGTGCTTTGACTGTTTTCATAGCAAGGCCTTCCTCGGT-GTACTTC 969494 Query 71932 GTATATAATCGTTCGAACTCGTCTCCCCAAG---CATTGTCTAATCCAGGACATTCATTC 71988 ||| || | | ||| || ||||| | | ||||| | || | ||| Sbjct 969493 TCATACAACCTCTTGAAGTCATCTCCATACGTCTCATTGAGTCCTCTTGCCTGATCA--- 969437 Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 ||| | | | ||| ||| ||| ||| | ||| || |||||| |||||||| ||| Sbjct 969436 GGAGAGAAGAGATTCCATTCTTCATTATCTTGCACTTTTTCCATAAACAGATCAGGTATC 969377 Query 72049 CAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG 72107 || | || ||| || |||||||| | || | ||||| || || ||||| ||| Sbjct 969376 CACAAGGC-ATAGAACAGATCTCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCGAAG 969318 Query 72108 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGG 72167 ||| |||||| | | | ||||| |||||| |||||||||||||| || | | || || Sbjct 969317 ATCCAGGAACTCAAAGACATCAGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCTGG 969258 Query 72168 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 72227 || || || || || ||||| | || || || || || ||| | |||||||||||||| Sbjct 969257 CCTCTTATTCCCACCTTGATCCACATACCTGGCTGTATTGTTAAACACTCTCAACATTGG 969198 Query 72228 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA-T 72286 || || |||||||| | ||||| || || | ||||||| ||| ||| | ||| | Sbjct 969197 AACTATTCCATTGGAAGTGCCATTTGTACCAGCGATATAGGATCCCTGGGCCCTTATATT 969138 Query 72287 TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 72346 || || || || | || || || || || || | ||| ||| | ||| | Sbjct 969137 TGAGGCGTG-TATCCCCAAGCCACCAGCAGCCTTCGAAATGAGTGCACATTTATGTAAGG 969079 Query 72347 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACA--T 72404 | || || || ||||| || ||||| || || || || || |||| Sbjct 969078 ATTTGTATATCCCATCTATTGAGTCGTCCATTATCCCCAGGAGGAAGCACGAGGACAAGA 969019 Query 72405 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 72464 ||| | | | ||||| | || || || || ||||| ||||| ||||| | | | Sbjct 969018 ATGG-CATGGGT-GTTCCTGAGTTGAACAACGTCGGAGACGCGTGTGTAAATAACCTCTG 968961 Query 72465 AGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGC 72524 |||| | | || |||| | ||| || ||||| ||| |||||| || | Sbjct 968960 GGACATCATGTCATAGGTCTGGACAGCAGACTCTATGTCCTTACCATGTATCCCCAAGCT 968901 Query 72525 GACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTA 72584 ||||||||| |||||| ||||||| ||||| | ||| || | |||| || || Sbjct 968900 GACACGCATAAACATAAACTGAGGTGTTTCAGCTATCAACGCATCAACCTTCAGGAAATA 968841 Query 72585 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620 || |||| |||||| | | | |||| |||||||| Sbjct 968840 TGACTTTTGCAAAGTCATGATAGCAAAGTAGTTGTA 968805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139141275320