Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq6 159 5e-34
>seq6
Length=1261692
Score = 159 bits (176), Expect = 5e-34
Identities = 388/578 (67%), Gaps = 20/578 (3%)
Strand=Plus/Plus
Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053
||| || || || | ||| ||||| |||||| || ||| || |||||| |||| |||||
Sbjct 57926 CCTCTTCCCTATTAAGTACCATGAGATTTGGCAAGCGTATAAGAAGGCTGAGGCTTCCTT 57985
Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113
||||| | ||| ||| | ||| | || ||||| || |||| ||| | | | ||||
Sbjct 57986 CTGGACTGCCGAGGAGATTGATTTATCAAAGGATTTGCACGACTGGAACAACAGATTGAA 58045
Query 125114 TGAAACTGAGCGAGAGTTTAT--ATCGCACATTT--TGGCCTTCTTTGCCGGCTCCGATG 125169
|| || |||| |||| | ||| || | ||||||| ||||||| || || |
Sbjct 58046 CGA----GAACGAGCGTTTCTTCATCTCAAGAGTGCTGGCCTTTTTTGCCGCTTCTGACG 58101
Query 125170 GAATCGTCAACGACAA-TCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTG 125228
| ||||||||||| || | ||||| | |||||| |||| | || |||||||
Sbjct 58102 GTATCGTCAACGAGAACTTGGTTGA-AAACTTCTCTGCAGAGGTTCAAATCCCAGAGGCT 58160
Query 125229 TCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACA 125288
|||||| || || ||||| |||||||| |||||| | ||||| || | |||||
Sbjct 58161 AAGTGCTTCTATGGGTTCCAGATCATGATGGAGAACATCCACTCTGAGACTTACTCCTTG 58220
Query 125289 CTGATTGACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCG 125346
|||| |||| ||||| || | ||| | | | | | | || ||||| || |
Sbjct 58221 TTGATCGACACCTACATCAAGGA--CCCAAAGGAGGCTGAGTTCTTGTTCAACGCCATTG 58278
Query 125347 ACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGAT---CGATGACG 125403
| || | || | ||| || |||||| | |||| | | ||||| |||||| |
Sbjct 58279 AAACCATCCCATGTATCAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGATG 58338
Query 125404 ACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTT 125463
|| | | | | || || ||||| || || || || || || || || |||||||| |
Sbjct 58339 AC--GCCCT-ATTTGCAGAGAGACTCGTTGCTTTTGCTGCTGTTGAAGGTATCTTCTTCT 58395
Query 125464 CGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGC 125523
| ||| || || ||||||||||| | |||||| | || | ||||| || ||||
Sbjct 58396 CCGGTTCATTCGCCTCCATCTTTTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACCT 58455
Query 125524 ACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACAC 125561
| ||||||||| || | || ||||| || |||||
Sbjct 58456 TCTCTAACGAGTTGATTTGCCGTGACGAAGGTTTACAC 58493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059135157320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |