Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6 159 5e-34 >seq6 Length=1261692 Score = 159 bits (176), Expect = 5e-34 Identities = 388/578 (67%), Gaps = 20/578 (3%) Strand=Plus/Plus Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053 ||| || || || | ||| ||||| |||||| || ||| || |||||| |||| ||||| Sbjct 57926 CCTCTTCCCTATTAAGTACCATGAGATTTGGCAAGCGTATAAGAAGGCTGAGGCTTCCTT 57985 Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113 ||||| | ||| ||| | ||| | || ||||| || |||| ||| | | | |||| Sbjct 57986 CTGGACTGCCGAGGAGATTGATTTATCAAAGGATTTGCACGACTGGAACAACAGATTGAA 58045 Query 125114 TGAAACTGAGCGAGAGTTTAT--ATCGCACATTT--TGGCCTTCTTTGCCGGCTCCGATG 125169 || || |||| |||| | ||| || | ||||||| ||||||| || || | Sbjct 58046 CGA----GAACGAGCGTTTCTTCATCTCAAGAGTGCTGGCCTTTTTTGCCGCTTCTGACG 58101 Query 125170 GAATCGTCAACGACAA-TCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTG 125228 | ||||||||||| || | ||||| | |||||| |||| | || ||||||| Sbjct 58102 GTATCGTCAACGAGAACTTGGTTGA-AAACTTCTCTGCAGAGGTTCAAATCCCAGAGGCT 58160 Query 125229 TCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACA 125288 |||||| || || ||||| |||||||| |||||| | ||||| || | ||||| Sbjct 58161 AAGTGCTTCTATGGGTTCCAGATCATGATGGAGAACATCCACTCTGAGACTTACTCCTTG 58220 Query 125289 CTGATTGACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCG 125346 |||| |||| ||||| || | ||| | | | | | | || ||||| || | Sbjct 58221 TTGATCGACACCTACATCAAGGA--CCCAAAGGAGGCTGAGTTCTTGTTCAACGCCATTG 58278 Query 125347 ACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGAT---CGATGACG 125403 | || | || | ||| || |||||| | |||| | | ||||| |||||| | Sbjct 58279 AAACCATCCCATGTATCAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGATG 58338 Query 125404 ACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTT 125463 || | | | | || || ||||| || || || || || || || || |||||||| | Sbjct 58339 AC--GCCCT-ATTTGCAGAGAGACTCGTTGCTTTTGCTGCTGTTGAAGGTATCTTCTTCT 58395 Query 125464 CGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGC 125523 | ||| || || ||||||||||| | |||||| | || | ||||| || |||| Sbjct 58396 CCGGTTCATTCGCCTCCATCTTTTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACCT 58455 Query 125524 ACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACAC 125561 | ||||||||| || | || ||||| || ||||| Sbjct 58456 TCTCTAACGAGTTGATTTGCCGTGACGAAGGTTTACAC 58493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059135157320