Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq3 136 3e-27
seq1 109 4e-19
seq4 95.1 9e-15
>seq3
Length=2123196
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| | ||| || ||||| ||||| || ||||| |||||||| ||
Sbjct 1815514 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 1815573
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| | || || ||||| || || || | ||||| | ||||||||| |||
Sbjct 1815574 AAAGTTCTACCATCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGG 1815633
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || |||||||| || ||| ||| || | || ||||| ||| || ||
Sbjct 1815634 ATACCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACC 1815693
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|| ||||||||||| |||||||| || ||||| || ||||||||||| ||
Sbjct 1815694 TCCAAGGTAATGGTCTTACCTGTAAGGGTTTTGACGAAAATTTGCATCTT 1815743
>seq1
Length=2451740
Score = 109 bits (120), Expect = 4e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| | ||| || ||||| ||||| || ||||| |||||||| ||
Sbjct 160698 CCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 160639
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| | || || ||||| || ||||| | ||||| | ||||||||| ||||
Sbjct 160638 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 160579
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || || ||||| || ||| ||| ||| | || ||||| || || ||
Sbjct 160578 ATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGACTCAACC 160519
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAA 15354
|| ||||||||||| ||||| |||| || || || ||
Sbjct 160518 TCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 160481
>seq4
Length=1931745
Score = 95.1 bits (104), Expect = 9e-15
Identities = 121/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| | ||| || ||||| ||||| || ||||| |||||||| ||
Sbjct 933736 CCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 933795
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| | || || |||||||| |||||| | ||||| | ||| ||||| ||||
Sbjct 933796 AAGGTTCTGCCATCCTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGTGGA 933855
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATC 15303
|| || || ||||| || ||| ||| || | || ||||| ||
Sbjct 933856 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTC 933902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362179169101587
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |