Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq6 174 4e-38 >seq6 Length=1261692 Score = 174 bits (192), Expect = 4e-38 Identities = 311/448 (69%), Gaps = 17/448 (4%) Strand=Plus/Plus Query 268856 CTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGT 268915 || || |||||||| | | ||| |||||||| ||||| || | || || || |||| | Sbjct 58077 CTGGCCTTTTTTGCCGCTTCTGACGGTATCGTCAACGAGAACTTGGTTGAAAACTTCTCT 58136 Query 268916 CAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAAT 268975 |||||| || || || || || | || || || || |||||||| || || || Sbjct 58137 GCAGAGGTTCAAATCCCAGAGGCTAAGTGCTTCTATGGGTTCCAGATCATGATGGAGAAC 58196 Query 268976 ATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAG 269035 || || || |||| ||| | || || || || || || | || | ||| | Sbjct 58197 ATCCACTCTGAGACTTACTCCTTGTTGATCGACACCTACATCAAGGAC-----CCAAAGG 58251 Query 269036 AAAA-GACTATTTTCTTCTA------TGAGAACTATGGACTGTGTGAGaaaaaaaTCTGA 269088 | || | | || ||| | ||| ||| || ||| | | || || |||| Sbjct 58252 AGGCTGAGT-TCTTGTTCAACGCCATTGA-AACCATCCCATGTATCAAGAAGAAGGCTGA 58309 Query 269089 ATGGGCTCTGAAATGGATAAACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTT 269145 |||||| ||| |||||| |||| | |||| || | ||| || | |||||||| Sbjct 58310 TTGGGCTTTGAGATGGATTGCCGATGATGACGCCCTATTTGCAGAGAGACTCGTTGCTTT 58369 Query 269146 TGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAA 269205 ||| ||||| |||||||| ||||| || || || || ||| | ||||||||||||||||| Sbjct 58370 TGCTGCTGTTGAAGGTATCTTCTTCTCCGGTTCATTCGCCTCCATCTTTTGGTTGAAGAA 58429 Query 269206 AAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTT 269265 ||||| | |||||||| || || ||||||||||| ||||| || | ||||||||||| Sbjct 58430 GAGAGGTTTGATGCCAGGTTTGACCTTCTCTAACGAGTTGATTTGCCGTGACGAAGGTTT 58489 Query 269266 ACACTGCGACTTCGCTTGTTTATTATTT 269293 |||| ||| ||||||||||| || ||| Sbjct 58490 ACACACCGATTTCGCTTGTTTGTTGTTT 58517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398296733956