Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6 138 2e-28 seq1 129 9e-26 >seq6 Length=1261692 Score = 138 bits (152), Expect = 2e-28 Identities = 176/240 (73%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||| ||| || |||||||||||||| |||||||||||||| || Sbjct 537230 GCTAAGCGTCACAGAAAGAT-TCTCCGTGATAACATCCAAGGTATCACCAAGCCAGCCAT 537172 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| ||||||||| |||||| ||| |||| ||||| | Sbjct 537171 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATCTCTGCTTTGATCTACGAAGAAGT 537112 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | |||| | ||| |||| | ||| ||||||| || ||| || || || || Sbjct 537111 CAGAGGTGTTCTCAAGTCCTTCTTGGAGAACGTTATCAGAGACGCTGTCACTTACACTGA 537052 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | || || ||||| || ||||| ||||||| || ||||| | ||||| Sbjct 537051 GCACGCAAAGAGAAAAACCGTCACTTCTTTGGATGTCGTCTACGCTTTGAAGAGACAAGG 536992 >seq1 Length=2451740 Score = 129 bits (142), Expect = 9e-26 Identities = 174/240 (73%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| ||| || |||||||||||||| ||||| |||||||| || Sbjct 771906 GCTAAGCGTCACAGAAAGAT-TCTCCGTGATAACATCCAAGGTATCACAAAGCCAGCCAT 771964 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| ||||||||| |||||| ||| |||| ||||| | Sbjct 771965 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATCTCTGCTTTGATCTACGAAGAAGT 772024 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | |||| | ||| |||| | ||| ||| ||| ||||| || || || || Sbjct 772025 CAGAGGTGTTCTCAAGTCCTTCTTGGAGAACGTCATCAGAGATGCCGTCACTTACACTGA 772084 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | || || ||||| || ||||| |||| || || ||||| | ||||| Sbjct 772085 GCACGCTAAGAGAAAAACCGTCACTTCTTTGGATGTCGTTTACGCTTTGAAGAGACAAGG 772144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075193599851