Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 >seq6 Length=1261692 Score = 114 bits (126), Expect = 1e-20 Identities = 358/557 (64%), Gaps = 5/557 (1%) Strand=Plus/Minus Query 21466 AAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGA 21525 ||||| |||||| || ||||| || |||||||| || | | || || || ||||| Sbjct 58517 AAACAACAAACAAGCGAAATCGGTGTGTAAACCTTCGTCACGGCAAATCAACTCGTTAGA 58458 Query 21526 AAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCC 21585 || || ||||| ||||| || |||||||| || |||||||| || || || |||| || Sbjct 58457 GAAGGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAAAAGATGGAGGCGAATGAACC 58398 Query 21586 TGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTC 21645 || ||||| || || ||||| |||||||| ||||| | || || | || | || Sbjct 58397 GGAGAAGAAGATACCTTCAACAGCAGCAAAAGCAACGAGTCTCTCTGCAAATAGGGCGTC 58338 Query 21646 TTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATC 21705 | ||| |||||| | ||||| | ||||| | || ||||| || || || Sbjct 58337 ATCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTGATACATGGGATGGTTTC 58278 Query 21706 AATAGCTTTTAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNN 21764 ||| || || || |||| | || | | || | ||| Sbjct 58277 AATGGCGTTGAACAAGAAC-TCAGCCTCCTTTGGGTCCTTGATGTAGGTGTCGATCAACA 58219 Query 21765 NACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTG 21824 || | ||||| || || || || ||| ||||| || || || || || | | Sbjct 58218 AGGAGTAAGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAACCCATAGAAGCACTTAG 58159 Query 21825 CCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884 |||||| ||||||||| | | | || || | ||||||| || || || || || | Sbjct 58158 CCTCTGGGATTTGAACCTCTGCAGAGAAGTTTTCAACCAAGTTCTCGTTGACGATACCGT 58099 Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT- 21943 || ||||||||||| |||| | || || || | || ||||| || | ||| Sbjct 58098 CAGAAGCGGCAAAAAAGGCCAGCACTCTTGAGATGAAGAAACGCTCGTTCTCGTTCAATC 58039 Query 21944 --TTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAG 22001 || ||||| || ||||| ||||||||||| | || || | ||||| ||| || Sbjct 58038 TGTTGTTCCAGTCGTGCAAATCCTTTGATAAATCAATCTCCTCGGCAGTCCAGAAGGAAG 57979 Query 22002 CAATAGCCTTTTTATAC 22018 | |||||| |||||| Sbjct 57978 CCTCAGCCTTCTTATAC 57962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900753458680