Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq5 286 4e-72
seq4 172 7e-38
>seq5
Length=1517892
Score = 286 bits (316), Expect = 4e-72
Identities = 752/1144 (66%), Gaps = 8/1144 (1%)
Strand=Plus/Minus
Query 62891 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 62950
||||| ||||||| |||||||| || ||||| | | | | || | | |||||
Sbjct 776053 GGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTC 775994
Query 62951 AGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 63010
| || | || | ||||||| | || || || | ||||| ||||||||||||
Sbjct 775993 ACAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTTACA 775934
Query 63011 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 63070
||||| |||||||| |||||||| |||||||||||| |||| | || | ||||| |
Sbjct 775933 AGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCATA 775874
Query 63071 CCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATA 63130
||||| | ||||||| | | | | | | | |||| |||||| ||||||
Sbjct 775873 CCAGAGCTTTTGAGCCTTCACAGTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTGTATA 775814
Query 63131 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACAT 63190
|||| ||| || || || || | ||| |||| |||| | |||| ||| | |
Sbjct 775813 CAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGAGAA 775754
Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250
|| | ||| || |||| | | || || ||||| || ||||| |||||||| | ||
Sbjct 775753 TAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAAGGC 775694
Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310
| || | ||| | | ||| || || || || |||||| | | ||||| |||
Sbjct 775693 TGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATATCGATGAA 775634
Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370
| | ||||| | ||||| || |||||||| | ||| | | || || | |||||
Sbjct 775633 ATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCTTGTT 775574
Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430
|| || || || | |||||| || ||||||||| | || | | ||| ||||| | |||
Sbjct 775573 ACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCAAACC 775514
Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490
|| || |||| |||||||| | ||| ||| || | | ||||| |||
Sbjct 775513 ATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACTTCTGATATTGTGAATGTG 775454
Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550
| ||| || || || || | |||||||| || || ||| | || || ||||| |||||
Sbjct 775453 CAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGTAGAT 775394
Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63610
||| || ||| || || |||| || || ||||| ||||| || | |
Sbjct 775393 ACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTGGGCTTGG 775334
Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670
||| || ||||| || || || ||||||||||| || || | |||||| | || ||
Sbjct 775333 AGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCAGGTT 775274
Query 63671 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63730
||| || ||||| | || | ||||| | || || || | || |||||||| |
Sbjct 775273 GTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCACACGCATCAC 775214
Query 63731 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63790
|| |||||| || | || | | ||| ||| | | | | |||||||||| | |||||
Sbjct 775213 CAAGTGCTGTGGACGCTCGGCAACTTTGCCGTTCACTCTGAGCAAGTAGGATCTCTCCAA 775154
Query 63791 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850
|| || |||||||| |||||||| ||||||| ||||| | ||| | ||||| |
Sbjct 775153 TGTCTTGAAACCAAAGTAGTTGTAGTTGAAGTCTCTGTCGTAGACAATGGCAGAGTTCAA 775094
Query 63851 TTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTT 63909
| |||||| | | | || |||| ||| | ||| || | || || | ||
Sbjct 775093 CTCATCCTTGAACTCTTGGACAATAT-CATAAGTCTCCTTAGACACCATTGGCGCGTG-- 775037
Query 63910 TCCCAT---TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 63966
| || | || || || | ||||||| | || || || ||||| | || ||| | |
Sbjct 775036 -CAAATTGGTCTTTGGGTTGATATAGTTGTACAACTCTTCAATCACAACGCTGAATTGCT 774978
Query 63967 tttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCG 64026
| | |||| |||||| | || || | ||| |||||||| || || | ||||| ||||
Sbjct 774977 TCGTGGTTTGCTTGTGCAAGTTGGAGATGGCGATTCTGGCAGCAAGCGTAGCATAGTCCG 774918
Query 64027 GATG 64030
| ||
Sbjct 774917 GGTG 774914
Score = 89.7 bits (98), Expect = 6e-13
Identities = 318/489 (65%), Gaps = 15/489 (3%)
Strand=Plus/Minus
Query 61994 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 62053
|||||||||||| | ||| ||||||| || || | | |||||||| || || || |
Sbjct 776971 TGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGTCTTCAA 776912
Query 62054 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT-GGAATAACT-CGGATCTGCT 62111
|| |||| ||||| || ||||| ||| ||||| || | || ||||
Sbjct 776911 GCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTACCCATGGTTGGGGCTCTG-- 776854
Query 62112 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 62171
||||| || |||| ||||||| ||| |||||| | || | | || |||||||| |
Sbjct 776853 ATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCAGCCATATCA 776794
Query 62172 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62230
||||| |||||||| | |||||||| | || || || || || | ||| ||| |||
Sbjct 776793 ATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAAGTCCTTCAATTGCTT-TGG 776735
Query 62231 AAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATC 62287
|| ||||| || || ||||| || || | || || ||||| || | ||
Sbjct 776734 AATGTTTGGCAAGTTTTGGATGGAACCGTTGTCGGATATGATGTGGTTCTTCATTGCGTC 776675
Query 62288 ATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 62344
|| ||| | | | | || ||| | | || | | || || || | || ||
Sbjct 776674 ATCCCAGA---TACCCAAGTCAACCAAATCACGCAGCAAGTATGGGTTCACAATCTGGAA 776618
Query 62345 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATT 62404
||| || | | || | |||| ||| |||||| || || || || | | || ||
Sbjct 776617 TTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTATGGCTCAAAACATTCGTT 776558
Query 62405 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62464
| ||||| ||||||| || || ||||| ||||| ||||| ||||| | | |||||
Sbjct 776557 GTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCT 776498
Query 62465 AAGACCGTA 62473
| ||| ||
Sbjct 776497 CATACCATA 776489
>seq4
Length=1931745
Score = 172 bits (190), Expect = 7e-38
Identities = 400/592 (68%), Gaps = 17/592 (3%)
Strand=Plus/Minus
Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947
||| || || || || ||||||||||| || | || | ||| ||| || | ||
Sbjct 969731 CAAAGCCACGGAAGCTAGATTACAAACAGCAATTTCTTCTGCAGAACTATACTGAACAAT 969672
Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007
||| ||| || || | | ||||| ||||| || |||| ||| || ||||| |||||
Sbjct 969671 TTCACAGCATAGGTTTGAAGATTTGATTGTTCCCAAGTTTTTTTGGTTGCTCTTCTTGTT 969612
Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067
||| || ||||||||||| |||||||| ||||||||| | || |||| ||| ||
Sbjct 969611 ACAAGCGTCCTTATAAAGCATGAATGGCCCACCAGTTTCCACTTGGCTCTCTAAAATGGC 969552
Query 63068 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCT---CCTTTCTCTTTCGTATA 63123
||||||| | ||| | || || | | | || || | |||| ||| | |||
Sbjct 969551 GTTCCAGA-GCCTCTGTGCTTTGACTGTT--TTCATAGCAAGGCCTTCCTCGGT-GTACT 969496
Query 63124 GTGTATACAATCGTTCGAACTCGTCTCCCCAAA---CATTGTCCAATCCAGGACATTCAT 63180
|||||| | | ||| || ||||| | ||||| | ||| | ||
Sbjct 969495 TCTCATACAACCTCTTGAAGTCATCTCCATACGTCTCATTG---AGTCCTCTTGCCTGAT 969439
Query 63181 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63240
| ||| | | | ||| ||| | | ||| | |||| || |||||| |||||||| |
Sbjct 969438 CAGGAGAGAAGAGATTCCATTCTTCATTATCTTGCACTTTTTCCATAAACAGATCAGGTA 969379
Query 63241 TCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 63299
|||| | || ||| || |||||||| | || ||||||| || || ||||| |
Sbjct 969378 TCCACAAGGC-ATAGAACAGATCTCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCGA 969320
Query 63300 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63359
||||| |||||| | | | ||||| |||||| |||||||||||||| || | | ||
Sbjct 969319 AGATCCAGGAACTCAAAGACATCAGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCT 969260
Query 63360 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63419
|||| || || || || ||||| | || || || || || ||| | ||||||||||||
Sbjct 969259 GGCCTCTTATTCCCACCTTGATCCACATACCTGGCTGTATTGTTAAACACTCTCAACATT 969200
Query 63420 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGG 63471
|||| || || || || | ||||| ||||| | ||||||| ||| ||||
Sbjct 969199 GGAACTATTCCATTGGAAGTGCCATTTGTACCAGCGATATAGGATCC-CTGG 969149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947145492120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |