Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq5 286 4e-72 seq4 172 7e-38 >seq5 Length=1517892 Score = 286 bits (316), Expect = 4e-72 Identities = 752/1144 (66%), Gaps = 8/1144 (1%) Strand=Plus/Minus Query 62891 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 62950 ||||| ||||||| |||||||| || ||||| | | | | || | | ||||| Sbjct 776053 GGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACAATCTC 775994 Query 62951 AGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 63010 | || | || | ||||||| | || || || | ||||| |||||||||||| Sbjct 775993 ACAACACAAGTTCGAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTTTGTTACA 775934 Query 63011 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 63070 ||||| |||||||| |||||||| |||||||||||| |||| | || | ||||| | Sbjct 775933 AGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGATCGCATA 775874 Query 63071 CCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATA 63130 ||||| | ||||||| | | | | | | | |||| |||||| |||||| Sbjct 775873 CCAGAGCTTTTGAGCCTTCACAGTCTTTCTTCCTTTACCTTCTTGTTCGTACTTTGTATA 775814 Query 63131 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACAT 63190 |||| ||| || || || || | ||| |||| |||| | |||| ||| | | Sbjct 775813 CAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTTGGAGAGAA 775754 Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250 || | ||| || |||| | | || || ||||| || ||||| |||||||| | || Sbjct 775753 TAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATCCACAAGGC 775694 Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 | || | ||| | | ||| || || || || |||||| | | ||||| ||| Sbjct 775693 TGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATATCGATGAA 775634 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | ||||| | ||||| || |||||||| | ||| | | || || | ||||| Sbjct 775633 ATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGTCTCTTGTT 775574 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 || || || || | |||||| || ||||||||| | || | | ||| ||||| | ||| Sbjct 775573 ACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGAATCAAACC 775514 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 || || |||| |||||||| | ||| ||| || | | ||||| ||| Sbjct 775513 ATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCTGTACTTCTGATATTGTGAATGTG 775454 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 | ||| || || || || | |||||||| || || ||| | || || ||||| ||||| Sbjct 775453 CAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGTGTCGTAGAT 775394 Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63610 ||| || ||| || || |||| || || ||||| ||||| || | | Sbjct 775393 ACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTGTGGGCTTGG 775334 Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 ||| || ||||| || || || ||||||||||| || || | |||||| | || || Sbjct 775333 AGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGACATCAGGTT 775274 Query 63671 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63730 ||| || ||||| | || | ||||| | || || || | || |||||||| | Sbjct 775273 GTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCACACGCATCAC 775214 Query 63731 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63790 || |||||| || | || | | ||| ||| | | | | |||||||||| | ||||| Sbjct 775213 CAAGTGCTGTGGACGCTCGGCAACTTTGCCGTTCACTCTGAGCAAGTAGGATCTCTCCAA 775154 Query 63791 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 || || |||||||| |||||||| ||||||| ||||| | ||| | ||||| | Sbjct 775153 TGTCTTGAAACCAAAGTAGTTGTAGTTGAAGTCTCTGTCGTAGACAATGGCAGAGTTCAA 775094 Query 63851 TTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTT 63909 | |||||| | | | || |||| ||| | ||| || | || || | || Sbjct 775093 CTCATCCTTGAACTCTTGGACAATAT-CATAAGTCTCCTTAGACACCATTGGCGCGTG-- 775037 Query 63910 TCCCAT---TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 63966 | || | || || || | ||||||| | || || || ||||| | || ||| | | Sbjct 775036 -CAAATTGGTCTTTGGGTTGATATAGTTGTACAACTCTTCAATCACAACGCTGAATTGCT 774978 Query 63967 tttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCG 64026 | | |||| |||||| | || || | ||| |||||||| || || | ||||| |||| Sbjct 774977 TCGTGGTTTGCTTGTGCAAGTTGGAGATGGCGATTCTGGCAGCAAGCGTAGCATAGTCCG 774918 Query 64027 GATG 64030 | || Sbjct 774917 GGTG 774914 Score = 89.7 bits (98), Expect = 6e-13 Identities = 318/489 (65%), Gaps = 15/489 (3%) Strand=Plus/Minus Query 61994 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 62053 |||||||||||| | ||| ||||||| || || | | |||||||| || || || | Sbjct 776971 TGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGTCTTCAA 776912 Query 62054 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT-GGAATAACT-CGGATCTGCT 62111 || |||| ||||| || ||||| ||| ||||| || | || |||| Sbjct 776911 GCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTACCCATGGTTGGGGCTCTG-- 776854 Query 62112 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 62171 ||||| || |||| ||||||| ||| |||||| | || | | || |||||||| | Sbjct 776853 ATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCAGCCATATCA 776794 Query 62172 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62230 ||||| |||||||| | |||||||| | || || || || || | ||| ||| ||| Sbjct 776793 ATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTACAAGTCCTTCAATTGCTT-TGG 776735 Query 62231 AAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATC 62287 || ||||| || || ||||| || || | || || ||||| || | || Sbjct 776734 AATGTTTGGCAAGTTTTGGATGGAACCGTTGTCGGATATGATGTGGTTCTTCATTGCGTC 776675 Query 62288 ATTCCATAATTTTCTC---TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAA 62344 || ||| | | | | || ||| | | || | | || || || | || || Sbjct 776674 ATCCCAGA---TACCCAAGTCAACCAAATCACGCAGCAAGTATGGGTTCACAATCTGGAA 776618 Query 62345 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATT 62404 ||| || | | || | |||| ||| |||||| || || || || | | || || Sbjct 776617 TTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTATGGCTCAAAACATTCGTT 776558 Query 62405 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62464 | ||||| ||||||| || || ||||| ||||| ||||| ||||| | | ||||| Sbjct 776557 GTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCAACCAAAAGAGAGTTTCT 776498 Query 62465 AAGACCGTA 62473 | ||| || Sbjct 776497 CATACCATA 776489 >seq4 Length=1931745 Score = 172 bits (190), Expect = 7e-38 Identities = 400/592 (68%), Gaps = 17/592 (3%) Strand=Plus/Minus Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947 ||| || || || || ||||||||||| || | || | ||| ||| || | || Sbjct 969731 CAAAGCCACGGAAGCTAGATTACAAACAGCAATTTCTTCTGCAGAACTATACTGAACAAT 969672 Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007 ||| ||| || || | | ||||| ||||| || |||| ||| || ||||| ||||| Sbjct 969671 TTCACAGCATAGGTTTGAAGATTTGATTGTTCCCAAGTTTTTTTGGTTGCTCTTCTTGTT 969612 Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067 ||| || ||||||||||| |||||||| ||||||||| | || |||| ||| || Sbjct 969611 ACAAGCGTCCTTATAAAGCATGAATGGCCCACCAGTTTCCACTTGGCTCTCTAAAATGGC 969552 Query 63068 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCT---CCTTTCTCTTTCGTATA 63123 ||||||| | ||| | || || | | | || || | |||| ||| | ||| Sbjct 969551 GTTCCAGA-GCCTCTGTGCTTTGACTGTT--TTCATAGCAAGGCCTTCCTCGGT-GTACT 969496 Query 63124 GTGTATACAATCGTTCGAACTCGTCTCCCCAAA---CATTGTCCAATCCAGGACATTCAT 63180 |||||| | | ||| || ||||| | ||||| | ||| | || Sbjct 969495 TCTCATACAACCTCTTGAAGTCATCTCCATACGTCTCATTG---AGTCCTCTTGCCTGAT 969439 Query 63181 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63240 | ||| | | | ||| ||| | | ||| | |||| || |||||| |||||||| | Sbjct 969438 CAGGAGAGAAGAGATTCCATTCTTCATTATCTTGCACTTTTTCCATAAACAGATCAGGTA 969379 Query 63241 TCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 63299 |||| | || ||| || |||||||| | || ||||||| || || ||||| | Sbjct 969378 TCCACAAGGC-ATAGAACAGATCTCTTGCTCGCAGTTCCTCCTTCCCATGGTTCTTCCGA 969320 Query 63300 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63359 ||||| |||||| | | | ||||| |||||| |||||||||||||| || | | || Sbjct 969319 AGATCCAGGAACTCAAAGACATCAGCATGCCATGGTTCCAAGTATATTGCAAAGGCCCCT 969260 Query 63360 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63419 |||| || || || || ||||| | || || || || || ||| | |||||||||||| Sbjct 969259 GGCCTCTTATTCCCACCTTGATCCACATACCTGGCTGTATTGTTAAACACTCTCAACATT 969200 Query 63420 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGG 63471 |||| || || || || | ||||| ||||| | ||||||| ||| |||| Sbjct 969199 GGAACTATTCCATTGGAAGTGCCATTTGTACCAGCGATATAGGATCC-CTGG 969149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947145492120