Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 9e-16 seq1 82.4 7e-11 >seq3 Length=2123196 Score = 98.7 bits (108), Expect = 9e-16 Identities = 166/239 (69%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 23980 AGCCAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAA 24038 || ||||| || |||||| | || || ||||| | || || || | |||||| | || Sbjct 1815752 AGACAAACCAAGATGCAAATTTTCGTCAAAACCCTTACAGGTAAGACCATTACCTTGGAG 1815693 Query 24039 GTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATA 24098 || ||| || ||||||||| || | ||||| ||||| |||||||| || || Sbjct 1815692 GTTGAGTCCTCCGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGTATC 1815633 Query 24099 CCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTC 24158 || || || ||||| ||| |||| | | ||| |||||| | || |||| |||| | Sbjct 1815632 CCACCAGACCAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGATGGTAGAACTTTG 1815573 Query 24159 AGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || ||||| ||||| || || || |||| || || | ||||||||||| || Sbjct 1815572 TCTGACTACAACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGG 1815514 >seq1 Length=2451740 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 || || || || || || || || | |||||| | || || ||| || |||||||| Sbjct 160481 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 160540 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||| ||||| || || || || || || ||||| ||| || Sbjct 160541 GACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAACAAAGATTG 160600 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||| | || |||| ||||| | | || || ||||| ||||| Sbjct 160601 ATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTACAACATCCAAAAG 160660 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || |||| || || | ||||||||||| || Sbjct 160661 GAGTCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGG 160698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935963321085